[16/Sep/2021:08:34:27.880349688 -0700] - CRIT - deadlock_threadmain - Serious Error---Failed in deadlock detect (aborted at 0x0), err=-30973 (BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery)
[16/Sep/2021:08:34:27.980810867 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
[16/Sep/2021:08:34:27.981036823 -0700] - CRIT - deadlock_threadmain - Serious Error---Failed in deadlock detect (aborted at 0x0), err=-30973 (BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery)
[16/Sep/2021:08:34:28.031642976 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
[16/Sep/2021:08:34:28.031856673 -0700] - ERR - trickle_threadmain - Serious Error---Failed to trickle, err=-30973 (BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery)
[16/Sep/2021:08:34:28.081390783 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
[16/Sep/2021:08:34:28.081634618 -0700] - CRIT - deadlock_threadmain - Serious Error---Failed in deadlock detect (aborted at 0x0), err=-30973 (BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery)
[16/Sep/2021:08:34:28.181946001 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
[16/Sep/2021:08:34:28.182160603 -0700] - CRIT - deadlock_threadmain - Serious Error---Failed in deadlock detect (aborted at 0x0), err=-30973 (BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery)
[16/Sep/2021:08:34:28.282366716 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
[16/Sep/2021:08:34:28.282650113 -0700] - ERR - trickle_threadmain - Serious Error---Failed to trickle, err=-30973 (BDB0087 DB_RUNRECOVERY: Fatal error, run database recovery)
[16/Sep/2021:08:34:28.283083329 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
On 9/16/21 5:20 PM, Kathy Zhu via FreeIPA-users wrote:
Is there anything else in the error log around these messages? This is kind of a generic error, and increasing the DN cache is not a guarantee it will resolve this.Hi List,
One of my ipa server's database had issue and left many log entries like the following in messages and slapd errors log:
Sep 16 08:34:28 ipa0 ns-slapd: [16/Sep/2021:08:34:28.886632992 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
Sep 16 08:34:29 ipa0 ns-slapd: [16/Sep/2021:08:34:28.987593487 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
Sep 16 08:34:29 ipa0 ns-slapd: [16/Sep/2021:08:34:29.035181321 -0700] - ERR - libdb - BDB0060 PANIC: fatal region error detected; run recovery
Restart ipa fixed the issue. I googled for root cause and found the verified solution - https://access.redhat.com/solutions/3098131, which is to increase nsslapd-dncachememsize to a reasonable value (>150MB). This sounds like easy, however, all slapd cache parameters are related. Red Hat Directory Server performance tuning guide explain a bit:
However, I wonder if there is a better guide.
Not really :-) There is a RHDS 11 version, but I think the performance tuning part is the same as RHDS 10.
Mark
Thanks.
Kathy.
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