29 Feb '20
The package rpms/paraview.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/paraview.git/commit/?id=973f42cb1f9….
Change:
+%ifarch ppc64le
Thanks.
Full change:
============
commit 973f42cb1f932e118e8d5708e946840967c5c370
Author: Orion Poplawski <orion(a)nwra.com>
Date: Sat Feb 29 12:13:56 2020 -0700
Use -g1 on arm to reduce memory usage; Fix requires exclude
diff --git a/paraview.spec b/paraview.spec
index 91ef3ea..112b2a7 100644
--- a/paraview.spec
+++ b/paraview.spec
@@ -222,9 +222,9 @@ Provides: bundled(xdmf2)
# Do not require anything provided in paraview's library directory
# This list needs to be maintained by hand
%if %{with protobuf}
-%global __requires_exclude ^lib(IceT|QtTesting|vtk).*$
+%global __requires_exclude ^lib(IceT|pq|QtTesting|vtk).*$
%else
-%global __requires_exclude ^lib(IceT|QtTesting|vtk|protobuf).*$
+%global __requires_exclude ^lib(IceT|pq|QtTesting|vtk|protobuf).*$
%endif
@@ -239,6 +239,7 @@ Provides: bundled(xdmf2)
%global paraview_cmake_options \\\
-DCMAKE_BUILD_TYPE=RelWithDebInfo \\\
+ -DCMAKE_CXX_FLAGS_RELWITHDEBINFO:STRING="-DNDEBUG" \\\
-DOpenGL_GL_PREFERENCE=GLVND \\\
-DPARAVIEW_VERSIONED_INSTALL:BOOL=OFF \\\
-DPARAVIEW_ENABLE_PYTHON:BOOL=ON \\\
@@ -494,8 +495,12 @@ cp %SOURCE2 VTK/CMake/FindPEGTL.cmake
#rm -r VTK
%build
-%ifarch ppc64le %{arm}
-%global _smp_mflags -j1
+# Try to limit memory consumption on some arches
+%ifarch %{arm}
+%global optflags %(echo %{optflags} | sed 's/-g /-g1 /')
+%endif
+%ifarch ppc64le
+%global _smp_mflags -j2
%endif
mkdir %{_target_platform}
pushd %{_target_platform}
1
0
29 Feb '20
The package rpms/paraview.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/paraview.git/commit/?id=973f42cb1f9….
Change:
+%ifarch ppc64le
Thanks.
Full change:
============
commit 973f42cb1f932e118e8d5708e946840967c5c370
Author: Orion Poplawski <orion(a)nwra.com>
Date: Sat Feb 29 12:13:56 2020 -0700
Use -g1 on arm to reduce memory usage; Fix requires exclude
diff --git a/paraview.spec b/paraview.spec
index 91ef3ea..112b2a7 100644
--- a/paraview.spec
+++ b/paraview.spec
@@ -222,9 +222,9 @@ Provides: bundled(xdmf2)
# Do not require anything provided in paraview's library directory
# This list needs to be maintained by hand
%if %{with protobuf}
-%global __requires_exclude ^lib(IceT|QtTesting|vtk).*$
+%global __requires_exclude ^lib(IceT|pq|QtTesting|vtk).*$
%else
-%global __requires_exclude ^lib(IceT|QtTesting|vtk|protobuf).*$
+%global __requires_exclude ^lib(IceT|pq|QtTesting|vtk|protobuf).*$
%endif
@@ -239,6 +239,7 @@ Provides: bundled(xdmf2)
%global paraview_cmake_options \\\
-DCMAKE_BUILD_TYPE=RelWithDebInfo \\\
+ -DCMAKE_CXX_FLAGS_RELWITHDEBINFO:STRING="-DNDEBUG" \\\
-DOpenGL_GL_PREFERENCE=GLVND \\\
-DPARAVIEW_VERSIONED_INSTALL:BOOL=OFF \\\
-DPARAVIEW_ENABLE_PYTHON:BOOL=ON \\\
@@ -494,8 +495,12 @@ cp %SOURCE2 VTK/CMake/FindPEGTL.cmake
#rm -r VTK
%build
-%ifarch ppc64le %{arm}
-%global _smp_mflags -j1
+# Try to limit memory consumption on some arches
+%ifarch %{arm}
+%global optflags %(echo %{optflags} | sed 's/-g /-g1 /')
+%endif
+%ifarch ppc64le
+%global _smp_mflags -j2
%endif
mkdir %{_target_platform}
pushd %{_target_platform}
1
0
29 Feb '20
The package rpms/arpack.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/arpack.git/commit/?id=976d3c3fc4a5c….
Change:
-%ifarch ppc64le
Thanks.
Full change:
============
commit 976d3c3fc4a5cc322cc85d035b495d6454d572f3
Author: Orion Poplawski <orion(a)nwra.com>
Date: Sat Feb 29 10:07:23 2020 -0700
Tests no longer failing on ppc64le
diff --git a/arpack.spec b/arpack.spec
index 86d8413..63e5b4c 100644
--- a/arpack.spec
+++ b/arpack.spec
@@ -16,7 +16,7 @@
Name: arpack
Version: 3.7.0
-Release: 4%{dist}
+Release: 6%{dist}
Summary: Fortran 77 subroutines for solving large scale eigenvalue problems
License: BSD
@@ -140,22 +140,12 @@ rm -r %{buildroot}%{_libdir}/*.la
%check
pushd src
-# Test failing on ppc64le https://github.com/opencollab/arpack-ng/issues/230
-%ifarch ppc64le
-%make_build check || :
-%else
%make_build check
-%endif
pushd EXAMPLES ; make clean ; popd
popd
%if %{build64}
pushd src64
-# Test failing on ppc64le https://github.com/opencollab/arpack-ng/issues/230
-%ifarch ppc64le
-%make_build check || :
-%else
%make_build check
-%endif
pushd EXAMPLES ; make clean ; popd
popd
%endif
@@ -193,6 +183,9 @@ popd
%changelog
+* Sat Feb 29 2020 Orion Poplawski <orion(a)nwra.com> - 3.7.0-6
+- Tests no longer failing on ppc64le
+
* Wed Feb 19 2020 David Schwrer <davidsch(a)fedoraproject.org> - 3.7.0-5
- fix failure with gcc 10
1
0
Architecture specific change in rpms/vapoursynth.git
by githook-noreply＠fedoraproject.org 29 Feb '20
by githook-noreply＠fedoraproject.org 29 Feb '20
29 Feb '20
The package rpms/vapoursynth.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/vapoursynth.git/commit/?id=2d74286a….
Change:
+ExclusiveArch: %{ix86} x86_64
Thanks.
Full change:
============
commit 2d74286a22e4d464ea396a7d0f31ed5f7adb42fd
Author: Simone Caronni <negativo17(a)gmail.com>
Date: Sat Feb 29 17:08:42 2020 +0100
ExclusiveArch for i686 and x86_64
diff --git a/vapoursynth.spec b/vapoursynth.spec
index a5462f8..56324e6 100644
--- a/vapoursynth.spec
+++ b/vapoursynth.spec
@@ -13,6 +13,8 @@ Source0: https://github.com/%{name}/%{name}/archive/R%{version}/%{name}-R%{ve
Patch0: %{name}-version-info.patch
Patch1: https://github.com/vapoursynth/vapoursynth/commit/a53ed4dda74d61d4cb56842dc…
+ExclusiveArch: %{ix86} x86_64
+
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: gcc-c++
1
0
Architecture specific change in rpms/vapoursynth.git
by githook-noreply＠fedoraproject.org 29 Feb '20
by githook-noreply＠fedoraproject.org 29 Feb '20
29 Feb '20
The package rpms/vapoursynth.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/vapoursynth.git/commit/?id=2d74286a….
Change:
+ExclusiveArch: %{ix86} x86_64
Thanks.
Full change:
============
commit 2d74286a22e4d464ea396a7d0f31ed5f7adb42fd
Author: Simone Caronni <negativo17(a)gmail.com>
Date: Sat Feb 29 17:08:42 2020 +0100
ExclusiveArch for i686 and x86_64
diff --git a/vapoursynth.spec b/vapoursynth.spec
index a5462f8..56324e6 100644
--- a/vapoursynth.spec
+++ b/vapoursynth.spec
@@ -13,6 +13,8 @@ Source0: https://github.com/%{name}/%{name}/archive/R%{version}/%{name}-R%{ve
Patch0: %{name}-version-info.patch
Patch1: https://github.com/vapoursynth/vapoursynth/commit/a53ed4dda74d61d4cb56842dc…
+ExclusiveArch: %{ix86} x86_64
+
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: gcc-c++
1
0
Architecture specific change in rpms/vapoursynth.git
by githook-noreply＠fedoraproject.org 29 Feb '20
by githook-noreply＠fedoraproject.org 29 Feb '20
29 Feb '20
The package rpms/vapoursynth.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/vapoursynth.git/commit/?id=2d74286a….
Change:
+ExclusiveArch: %{ix86} x86_64
Thanks.
Full change:
============
commit 2d74286a22e4d464ea396a7d0f31ed5f7adb42fd
Author: Simone Caronni <negativo17(a)gmail.com>
Date: Sat Feb 29 17:08:42 2020 +0100
ExclusiveArch for i686 and x86_64
diff --git a/vapoursynth.spec b/vapoursynth.spec
index a5462f8..56324e6 100644
--- a/vapoursynth.spec
+++ b/vapoursynth.spec
@@ -13,6 +13,8 @@ Source0: https://github.com/%{name}/%{name}/archive/R%{version}/%{name}-R%{ve
Patch0: %{name}-version-info.patch
Patch1: https://github.com/vapoursynth/vapoursynth/commit/a53ed4dda74d61d4cb56842dc…
+ExclusiveArch: %{ix86} x86_64
+
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: gcc-c++
1
0
Architecture specific change in rpms/vapoursynth.git
by githook-noreply＠fedoraproject.org 29 Feb '20
by githook-noreply＠fedoraproject.org 29 Feb '20
29 Feb '20
The package rpms/vapoursynth.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/vapoursynth.git/commit/?id=2d74286a….
Change:
+ExclusiveArch: %{ix86} x86_64
Thanks.
Full change:
============
commit 2d74286a22e4d464ea396a7d0f31ed5f7adb42fd
Author: Simone Caronni <negativo17(a)gmail.com>
Date: Sat Feb 29 17:08:42 2020 +0100
ExclusiveArch for i686 and x86_64
diff --git a/vapoursynth.spec b/vapoursynth.spec
index a5462f8..56324e6 100644
--- a/vapoursynth.spec
+++ b/vapoursynth.spec
@@ -13,6 +13,8 @@ Source0: https://github.com/%{name}/%{name}/archive/R%{version}/%{name}-R%{ve
Patch0: %{name}-version-info.patch
Patch1: https://github.com/vapoursynth/vapoursynth/commit/a53ed4dda74d61d4cb56842dc…
+ExclusiveArch: %{ix86} x86_64
+
BuildRequires: autoconf
BuildRequires: automake
BuildRequires: gcc-c++
1
0
29 Feb '20
The package rpms/exciting.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/exciting.git/commit/?id=26527b325ca….
Change:
-ExclusiveArch: x86_64 %{ix86} aarch64 %{arm} %{power64}
Thanks.
Full change:
============
commit 26527b325ca98249c77a6f266c8c90fae08c984a
Author: Miro Hronok <miro(a)hroncok.cz>
Date: Sat Feb 29 10:49:08 2020 +0100
Orphaned for 6+ weeks
diff --git a/.gitignore b/.gitignore
deleted file mode 100644
index 0a555c4..0000000
--- a/.gitignore
+++ /dev/null
@@ -1,3 +0,0 @@
-/exciting.boron-10.tar.gz
-/exciting.fftw3.zfftifc.f90.patch
-/exciting.carbon.tar.gz
diff --git a/dead.package b/dead.package
new file mode 100644
index 0000000..5204a84
--- /dev/null
+++ b/dead.package
@@ -0,0 +1 @@
+Orphaned for 6+ weeks
diff --git a/exciting.fftw3.zfftifc.f90.patch b/exciting.fftw3.zfftifc.f90.patch
deleted file mode 100644
index 5842848..0000000
--- a/exciting.fftw3.zfftifc.f90.patch
+++ /dev/null
@@ -1,11 +0,0 @@
---- src//zfftifc.f90.orig 2015-12-11 12:59:58.000000000 +0000
-+++ src//zfftifc.f90 2015-12-17 15:24:11.753772595 +0000
-@@ -103,7 +103,7 @@
- !----------------------------------------!
- ! interface to modified FFTPACK5 !
- !----------------------------------------!
-- Call cfftnd (nd, n, sgn, z)
-+! Call cfftnd (nd, n, sgn, z)
- #endif
- !
- Return
diff --git a/exciting.spec b/exciting.spec
deleted file mode 100644
index 573565a..0000000
--- a/exciting.spec
+++ /dev/null
@@ -1,457 +0,0 @@
-# Warning:
-# Anyone editing this spec file please make sure the same spec file
-# works on other fedora and epel releases, which are supported by this software.
-# No quick Rawhide-only fixes will be allowed.
-
-# missing on el6
-%{?!_fmoddir: %global _fmoddir %{_libdir}/gfortran/modules}
-
-%global nametag exciting
-%global versiontag carbon
-
-%global all serial mpi spacegroup stateinfo stateconvert species
-
-# versiontag to versionnumber conversion - just count releases
-%if "%{versiontag}" == "lithium"
-%global versionnumber 5
-%endif
-%if "%{versiontag}" == "beryllium"
-%global versionnumber 6
-%endif
-%if "%{versiontag}" == "boron"
-%global versionnumber 10
-%endif
-%if "%{versiontag}" == "carbon"
-%global versionnumber 12
-%endif
-%if "%{versiontag}" == "nitrogen"
-%global versionnumber 13
-%endif
-
-%if 0%{?el6}
-# el6/ppc64 Error: No Package found for mpich-devel
-ExclusiveArch: x86_64 %{ix86}
-%else
-%if 0%{?fedora} == 28
-ExclusiveArch: x86_64 %{ix86} aarch64 %{power64}
-%else
-ExclusiveArch: x86_64 %{ix86} aarch64 %{arm} %{power64}
-%endif
-%endif
-
-%global ARPACK -L%{_libdir} -larpack
-%global BLASLAPACK -L%{_libdir} -lopenblas
-%global FFTW -L%{_libdir} -lfftw3
-
-%if 0%{?fedora} >= 25
-%global LIBXC -L%{_libdir} -lxc -lxcf90
-%else
-%global LIBXC -L%{_libdir} -lxc
-%endif
-
-# FoX-config --libs --shared --pretty
-%global FOX -lFoX_wkml -lFoX_dompp -lFoX_sax -lFoX_wcml -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys
-
-Name: %{nametag}
-Version: %{versionnumber}
-Release: 18%{?dist}
-Summary: A full-potential all-electron density-functional-theory package
-
-License: GPLv2+
-URL: http://exciting-code.org/
-Source0: http://exciting.wdfiles.com/local--files/%{versiontag}/%{name}.%{versiontag…
-Patch0: %{name}.fftw3.zfftifc.f90.patch
-
-# handle license on el{6,7}: global must be defined after the License field above
-%{!?_licensedir: %global license %doc}
-
-BuildRequires: lynx
-%if 0%{?fedora}
-BuildRequires: perl-interpreter
-%else
-BuildRequires: perl
-%endif
-%if 0%{?fedora} || 0%{?el7}
-BuildRequires: perl-Data-Dumper
-%endif
-BuildRequires: time
-BuildRequires: libxslt
-
-BuildRequires: gcc-gfortran
-BuildRequires: arpack-devel
-BuildRequires: openblas-devel
-BuildRequires: fftw3-devel
-BuildRequires: libxc-devel
-BuildRequires: FoXlibf-devel
-
-# /etc/profile.d is owned by setup
-Requires: setup
-Requires: %{name}-species = %{version}-%{release}
-
-
-%global desc_base \
-exciting is a full-potential all-electron density-functional-theory (DFT)\
-package implementing the families of linearized augmented planewave (LAPW)\
-methods. It can be applied to all kinds of materials, irrespective of the\
-atomic species involved, and also allows for exploring the physics of core\
-electrons. A particular focus are excited states within many-body perturbation\
-theory (MBPT).
-
-
-%description
-%{desc_base}
-
-
-%package openmpi
-Summary: %{name} - openmpi version
-BuildRequires: openmpi-devel
-Requires: %{name}-species = %{version}-%{release}
-
-%description openmpi
-%{desc_base}
-
-This package contains the openmpi version.
-
-
-%package mpich
-Summary: %{name} - mpich version
-BuildRequires: mpich-devel
-Requires: %{name}-species = %{version}-%{release}
-
-%description mpich
-%{desc_base}
-
-This package contains the mpich version.
-
-
-%package species
-Summary: %{name} - species files
-Requires: %{name}-common = %{version}-%{release}
-BuildArch: noarch
-
-%description species
-%{desc_base}
-
-This package contains the species files.
-
-
-%package common
-Summary: %{name} - common files
-
-%description common
-%{desc_base}
-
-This package contains the common binaries.
-
-
-%prep
-%setup -q -n %{name}
-# create common make.inc
-# serial
-echo "F90 = gfortran -ffree-line-length-none" > make.inc.serial
-echo "F90_OPTS = -I%{_fmoddir} -I/usr/include/FoX %{optflags}" >> make.inc.serial
-echo "F77 = \$(F90)" >> make.inc.serial
-echo "F77_OPTS = \$(F90_OPTS)" >> make.inc.serial
-echo "CPP_ON_OPT = -cpp -DXS -DISO -DLIBXC -DFFTW" >> make.inc.serial
-echo "AR = ar" >> make.inc.serial
-echo "LIB_ARP = %ARPACK" >> make.inc.serial
-echo "USE_SYS_LAPACK=true" >> make.inc.serial
-echo "LIB_LPK = %BLASLAPACK" >> make.inc.serial
-echo "LIB_FFT = %FFTW" >> make.inc.serial
-echo "LIB_BZINT = libbzint.a" >> make.inc.serial
-echo "LIBS = \$(LIB_ARP) \$(LIB_LPK) \$(LIB_FFT) \$(LIB_BZINT)" >> make.inc.serial
-echo "F90_DEBUGOPTS = \$(F90_OPTS)" >> make.inc.serial
-echo "F77_DEBUGOPTS = \$(F90_OPTS)" >> make.inc.serial
-# mpi
-echo "MPIF90 = mpif90 -ffree-line-length-none" > make.inc.mpi
-echo "MPIF90_OPTS = -I\$(MPIMODDIR) \$(F90_OPTS) \$(CPP_ON_OPT) -DMPI -DMPIRHO -DMPISEC" >> make.inc.mpi
-# smp
-echo "F77MT = \$(F77)" > make.inc.smp
-echo "F90MT = \$(F90)" >> make.inc.smp
-echo "SMP_LIBS = \$(LIBS)" >> make.inc.smp
-echo "SMPF90_OPTS = -fopenmp \$(F90_OPTS)" >> make.inc.smp
-echo "SMPF77_OPTS = \$(SMPF90_OPTS)" >> make.inc.smp
-# mpismp
-echo "MPIF90MT = \$(MPIF90)" > make.inc.mpismp
-echo "MPISMPF90_OPTS = \$(SMPF90_OPTS) -DMPI -DMPIRHO -DMPISECBUILDMPI=false" >> make.inc.mpismp
-
-# fix species/Makefile when linking fftw (uses zfftifc.f90)
-sed -i "s|\$(LIB_LPK)|\$(LIB_LPK) \$(LIB_FFT)|" src/species/template
-
-# remove bundling of BLAS/LAPACK/FFTW/LIBXC/ERF/ARPACK/FOX
-%patch0 -p0
-sed -i "s/blas lapack fft exciting/exciting/" src/Makefile
-sed -i "s|LIBXCMOD=.*|LIBXCMOD=|" build/Make.common
-sed -i "s/ libxc.a / /" build/Make.common
-sed -i "s/ libfox/ /" build/Make.common
-sed -i "s/ -lFoX_dom -lFoX_sax -lFoX_utils -lFoX_wcml -lFoX_wxml -lFoX_fsys -lFoX_common//" build/libraries.inc
-sed -i "s/ fox//" src/species/Makefile
-sed -i "s|INTLIBS=-lxc|INTLIBS=%BLASLAPACK %FFTW %LIBXC %FOX|" build/libraries.inc
-sed -i "s/erf.f90//" src/Makefile
-sed -i "s/, erf//" src/src_lib/stheta_mp.f90
-sed -i "s/external erf//" src/genrmesh.f90
-# remove bundled sources
-rm -rf src/LAPACK src/BLAS src/fftlib src/libXC src/ARPACK src/FoX
-rm -f src/src_lib/erf.f90
-
-%if 0%{?fedora} >= 31
-# https://fedoraproject.org/wiki/Changes/Make_ambiguous_python_shebangs_error
-sed -i "s|/usr/bin/python|/usr/bin/python3|" xml/inputfileconverter/Wien2ktoExciting.py
-%endif
-
-%build
-# Have to do off-root builds to be able to build many versions at once
-mv src src.orig
-
-# To avoid replicated code define a macro
-%global dobuild() \
-cat make.inc.serial make.inc.smp make.inc.mpi make.inc.mpismp > make.inc&& \
-echo "MPIMODDIR = $MPI_FORTRAN_MOD_DIR" | tac make.inc - | tac > make.inc$MPI_SUFFIX&& \
-echo "BUILDMPI = true" >> make.inc$MPI_SUFFIX&& \
-echo "BUILDMPISMP = true" >> make.inc$MPI_SUFFIX&& \
-cp -fp make.inc$MPI_SUFFIX build/make.inc&& \
-cat build/make.inc&& \
-%{__make} %{all}&& \
-cd bin&& \
-for f in %{name}mpi*; do cp -pv $f ../bin.save/${f}$MPI_SUFFIX; done&& \
-cd ..&& \
-%{__make} clean
-
-
-# build serial/openmp version
-export MPI_SUFFIX=_openmp
-# keep executables in a separate directory
-mkdir bin.save
-cp -rp src.orig src
-cat make.inc.serial make.inc.smp > make.inc$MPI_SUFFIX
-echo "BUILDSMP = true" >> make.inc$MPI_SUFFIX
-cp -fp make.inc$MPI_SUFFIX build/make.inc
-cat build/make.inc
-%{__make} %{all}
-mv bin/%{name}ser bin.save
-cd bin
-for f in *; do cp -pv $f ../bin.save/%{name}-${f}; done
-cd ..
-%{__make} clean
-rm -rf src
-
-# build openmpi version
-cp -rp src.orig src
-%{_openmpi_load}
-%dobuild
-%{_openmpi_unload}
-rm -rf src
-
-cp -rp src.orig src
-# build mpich version
-%{_mpich_load}
-%dobuild
-%{_mpich_unload}
-# leave last src build for debuginfo
-
-# clean (dir incomplete - only last mpi build is there)
-rm -rf bin
-# all executables go to bin (bin will be used for test)
-# note that excitingdebug will be created in bin!
-# Moreover due to the fact (i guess) we are moving binaries
-# around a new excitingser is generated by tests
-cp -rp bin.save bin
-
-cat <<EOF > %{name}.sh
-# NOTE: This is an automatically-generated file! (generated by the
-# %%{name} RPM). Any changes made here will be lost if the RPM is
-# uninstalled or upgraded.
-
-PA=%{_datadir}/%{name}
-
-case \$EXCITINGROOT in
- *\${PA}*);;
- *?*) EXCITINGROOT=\${PA}:\${EXCITINGROOT};;
- *) EXCITINGROOT=\${PA};;
-esac
-export EXCITINGROOT
-
-EOF
-
-cat <<EOF > %{name}.csh
-# NOTE: This is an automatically-generated file! (generated by the
-# %%{name} RPM). Any changes made here will be lost if the RPM is
-# uninstalled or upgraded.
-
-# must end with slash!
-set PA=%{_datadir}/%{name}
-
-if (\$?EXCITINGROOT) then
- if ("\$EXCITINGROOT" !~ *\${PA}*) then
- setenv EXCITINGROOT \${PA}:\${EXCITINGROOT}
- endif
-else
- setenv EXCITINGROOT \${PA}
-endif
-
-unset PA
-EOF
-
-
-%install
-mkdir -p $RPM_BUILD_ROOT%{_sysconfdir}
-
-# To avoid replicated code define a macro
-%global doinstall() \
-mkdir -p $RPM_BUILD_ROOT/$MPI_BIN&& \
-install -p -m 755 bin.save/%{name}*$MPI_SUFFIX $RPM_BUILD_ROOT/$MPI_BIN&& \
-rm -fv bin.save/%{name}*$MPI_SUFFIX
-
-# install openmpi version
-%{_openmpi_load}
-%doinstall
-%{_openmpi_unload}
-
-# install mpich version
-%{_mpich_load}
-%doinstall
-%{_mpich_unload}
-
-# install serial version
-mkdir -p $RPM_BUILD_ROOT%{_bindir}
-install -p -m 755 bin.save/* $RPM_BUILD_ROOT%{_bindir}
-
-mkdir -p $RPM_BUILD_ROOT%{_datadir}/%{name}
-
-# don't copy tools - they trigger dependency on perl, python ...
-cp -rp species xml $RPM_BUILD_ROOT%{_datadir}/%{name}
-cp -p build/Make.common build/libraries.inc make.inc* $RPM_BUILD_ROOT%{_datadir}/%{name}
-# don't copy test - it provides perl(XML::Simple), perl(XML::Writer), ...
-
-# env scripts
-install -p -m 444 %{name}*.*sh $RPM_BUILD_ROOT%{_datadir}/%{name}
-mkdir -p $RPM_BUILD_ROOT%{_sysconfdir}/profile.d
-install -p -m 444 %{name}*.*sh $RPM_BUILD_ROOT%{_sysconfdir}/profile.d
-
-
-%check
-
-# Warning: make test compiles debug executables
-# One should be testing only already built and installed binaries!
-
-export NPROC=2 # test on 1 core
-export OMP_NUM_THREADS=$NPROC
-
-# To avoid replicated code define a macro
-%global docheck() \
-cp -rp test.orig test&& \
-sed -i "s|EXE = ../bin/excitingmpi|EXE = $EXCITING_EXECUTABLE|" test/Makefile &&\
-time %{__make} test 2>&1 | tee tests.${NPROC}$MPI_SUFFIX.log&& \
-cd test/report&& \
-for f in report*{html,xml}; do if test -r $f; then cp -pv $f ../../${f}$MPI_SUFFIX; fi; done&& \
-cd -&& \
-ln -s report.html$MPI_SUFFIX report.html${MPI_SUFFIX}.html&& \
-if test -r report.html$MPI_SUFFIX.html; then lynx -dump report.html$MPI_SUFFIX.html; fi&& \
-rm -rf test
-
-mv test test.orig
-# http://exciting-code.org/forum/t-1980337/exciting-carbon-tar-gz:how-to-run-…
-sed -i 's|../../$(EXE)|$(EXE)|' test.orig/Makefile
-
-# check openmpi version
-%{_openmpi_load}
-EXCITING_EXECUTABLE="mpiexec -np ${NPROC} ../../../bin/%{name}mpi$MPI_SUFFIX" %docheck
-%{_openmpi_unload}
-
-# this will fail for mpich2 on el6 - mpd would need to be started ...
-# check mpich version
-%{_mpich_load}
-EXCITING_EXECUTABLE="mpiexec -np ${NPROC} ../../../bin/%{name}mpi$MPI_SUFFIX" %docheck
-%{_mpich_unload}
-
-# restore test
-mv test.orig test
-
-# compare bin after make test - make sure exit status is 0!
-diff -r --brief bin.save bin || /bin/true
-
-
-%files
-%{_bindir}/%{name}ser
-
-
-%files common
-%license COPYING README
-%{_bindir}/%{name}-*
-%{_datadir}/%{name}
-%exclude %{_datadir}/%{name}/species
-%config(noreplace) %{_sysconfdir}/profile.d/%{name}*.*sh
-
-
-%files species
-%{_datadir}/%{name}/species
-
-
-%files openmpi
-%{_libdir}/openmpi%{?_opt_cc_suffix}/bin/%{name}*_openmpi
-
-
-%files mpich
-%{_libdir}/mpich%{?_opt_cc_suffix}/bin/%{name}*_mpich
-
-
-%changelog
-* Tue Jan 28 2020 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-18
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
-
-* Thu Aug 15 2019 Marcin Dulak <Marcin.Dulak(a)gmail.com> 12-17
-- switch to python3 on fedora >= 31
-
-* Thu Jul 25 2019 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-16
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
-
-* Thu Feb 14 2019 Orion Poplawski <orion(a)nwra.com> - 12-15
-- Rebuild for openmpi 3.1.3
-
-* Thu Jan 31 2019 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-14
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
-
-* Sun Dec 23 2018 Marcin Dulak <Marcin.Dulak(a)gmail.com> 12-13
-- Fix "Make ambiguous python shebangs error" bug #1653127
-
-* Fri Jul 13 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-12
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
-
-* Wed Feb 07 2018 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-11
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
-
-* Mon Oct 23 2017 Susi Lehtola <susi.lehtola(a)iki.fi> - 12-10
-- Rebuild against libxc 4.
-
-* Wed Aug 02 2017 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-9
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
-
-* Wed Jul 26 2017 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-8
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
-
-* Fri Feb 10 2017 Fedora Release Engineering <releng(a)fedoraproject.org> - 12-7
-- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
-
-* Mon Oct 31 2016 Marcin Dulak <Marcin.Dulak(a)gmail.com> 12-6
-- new upstream release
-- libxc 3 on fedora >= 25
-- no mpich-devel on el6/ppc64
-- -DTETRA removed
-- no more smp and mpiandsmp defined in src/Makefile
-- make all no longer includes all targets, like eos etc.
-
-* Thu Jul 14 2016 Peter Robinson <pbrobinson(a)fedoraproject.org> 10-5
-- openblas supported on Power64
-
-* Wed Jul 13 2016 Peter Robinson <pbrobinson(a)fedoraproject.org> 10-4
-- aarch64 now has openblas
-
-* Thu Apr 21 2016 Susi Lehtola <jussilehtola(a)fedoraproject.org> 10-3
-- Rebuild against libxc 3.0.0.
-
-* Sat Feb 13 2016 Marcin Dulak <Marcin.Dulak(a)gmail.com> 10-2
-- removed defattr
-- added armv7hl ppc64le
-
-* Wed Dec 16 2015 Marcin Dulak <Marcin.Dulak(a)gmail.com> 10-1
-- initial build
diff --git a/sources b/sources
deleted file mode 100644
index 559c7f9..0000000
--- a/sources
+++ /dev/null
@@ -1,2 +0,0 @@
-043a3cae8a8de77db655067cbb113fc0 exciting.fftw3.zfftifc.f90.patch
-ef5b3e40448df12fcc09b92709780ca2 exciting.carbon.tar.gz
1
0
New package excluding arches (1)
============================
- rust-quickcheck_macros
ExclusiveArch: %{rust_arches}
Package that edited their arches constraints (1)
=============================================
- sagemath
was ExclusiveArch: aarch64 %{arm} %{ix86} x86_64 ppc sparcv9
is ExclusiveArch: aarch64 %{ix86} x86_64 ppc sparcv9
List of packages currently excluding arches (2745)
===========================================
- 0ad
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 ppc64le
- 90-Second-Portraits
ExclusiveArch: %{arm} %{ix86} x86_64 %{mips} aarch64 ppc64
- GoldenCheetah
ExclusiveArch: %{qt5_qtwebengine_arches}
- GtkAda
ExclusiveArch: %{GPRbuild_arches}
- GtkAda3
ExclusiveArch: %{GPRbuild_arches}
- PragmARC
ExclusiveArch: %{GPRbuild_arches}
- R-V8
ExclusiveArch: %{nodejs_arches}
- RdRand
ExclusiveArch: %{ix86} x86_64
- SLOF
ExclusiveArch: ppc64le
- YafaRay
ExclusiveArch: %{ix86} x86_64
- aboot
ExclusiveArch: alpha
- acpid
ExclusiveArch: ia64 x86_64 %{ix86} %{arm} aarch64
- ahven
ExclusiveArch: %{GPRbuild_arches}
- alleyoop
ExclusiveArch: %{ix86} x86_64 ppc ppc64 ppc64le s390x %{arm} aarch64
- american-fuzzy-lop
ExclusiveArch: %{ix86} x86_64
- anet
ExclusiveArch: %{GPRbuild_arches}
- apmd
ExclusiveArch: %{ix86}
- appstream-generator
ExclusiveArch: x86_64 %{ix86} %{arm}
- arduino
ExclusiveArch: %{go_arches}
- arduino-builder
ExclusiveArch: %{go_arches}
- arm-trusted-firmware
ExclusiveArch: aarch64
- aunit
ExclusiveArch: %GPRbuild_arches
- avgtime
ExclusiveArch: %{ldc_arches}
- aws
ExclusiveArch: %GPRbuild_arches
- banshee
ExclusiveArch: %{mono_arches}
- banshee-community-extensions
ExclusiveArch: %ix86 x86_64 ppc ppc64 ia64 %{arm} sparcv9 alpha s390x
- bareftp
ExclusiveArch: %{mono_arches}
- bcal
ExclusiveArch: x86_64 aarch64 ia64 ppc64 ppc64le s390x
- bcc
ExclusiveArch: x86_64 %{power64} aarch64 s390x
- bcm283x-firmware
ExclusiveArch: %{arm} aarch64
- berusky2
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 %{mips}
- biosdevname
ExclusiveArch: %{ix86} x86_64
- bless
ExclusiveArch: %mono_arches
- boo
ExclusiveArch: %{mono_arches}
- bpftrace
ExclusiveArch: x86_64 %{power64} aarch64 s390x
- bwa
ExclusiveArch: x86_64
- calamares
ExclusiveArch: %{ix86} x86_64
- calibre
ExclusiveArch: %{qt5_qtwebengine_arches}
- carto
ExclusiveArch: %{nodejs_arches} noarch
- ccdciel
ExclusiveArch: %{fpc_arches}
- cdcollect
ExclusiveArch: %{mono_arches}
- chromium
ExclusiveArch: x86_64 i686
ExclusiveArch: x86_64 i686 aarch64
- cjdns
ExclusiveArch: %{nodejs_arches}
- cmospwd
ExclusiveArch: %{ix86} x86_64
- cmrt
ExclusiveArch: %{ix86} x86_64 ia64
- coffee-script
ExclusiveArch: %{nodejs_arches} noarch
- colorful
ExclusiveArch: %{fpc_arches}
- containers
ExclusiveArch: %{ldc_arches}
- cpu-x
ExclusiveArch: i686 x86_64
- cpuid
ExclusiveArch: %{ix86} x86_64
- cqrlog
ExclusiveArch: %{fpc_arches}
- crash
ExclusiveArch: %{ix86} ia64 x86_64 ppc ppc64 s390 s390x %{arm} aarch64 ppc64le
- cri-tools
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 aarch64 %{arm}}
- criu
ExclusiveArch: x86_64 %{arm} ppc64le aarch64 s390x
- cryptlib
ExclusiveArch: x86_64 %{ix86} aarch64 ppc64 ppc64le
- cryptobone
ExclusiveArch: x86_64 %{ix86} ppc64 ppc64le aarch64
- daq
ExclusiveArch: x86_64 aarch64
- darktable
ExclusiveArch: x86_64 aarch64 ppc64le
- dbus-sharp
ExclusiveArch: %mono_arches
- dbus-sharp-glib
ExclusiveArch: %mono_arches
- dbxtool
ExclusiveArch: i386 x86_64 aarch64
- deepin-daemon
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 aarch64 %{arm}}
- discord-irc
ExclusiveArch: %{nodejs_arches} noarch
- dlm
ExclusiveArch: i686 x86_64
- dmidecode
ExclusiveArch: %{ix86} x86_64 ia64 aarch64
- docco
ExclusiveArch: %{nodejs_arches} noarch
- docker-distribution
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 %{arm}}
- dolphin-emu
ExclusiveArch: x86_64 armv7l aarch64
- dotnet-build-reference-packages
ExclusiveArch: x86_64
- dotnet3.1
ExclusiveArch: x86_64
- doublecmd
ExclusiveArch: %{ix86} x86_64
- dpdk
ExclusiveArch: x86_64 i686 aarch64 ppc64le
- dssi-vst
ExclusiveArch: %{ix86} x86_64
- dyninst
ExclusiveArch: %{ix86} x86_64 ppc64le aarch64
- e3
ExclusiveArch: %{ix86} x86_64
- edac-utils
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 %{power64}
- edb
ExclusiveArch: %{ix86} x86_64
- edk2
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64
ExclusiveArch: x86_64 aarch64
- efibootmgr
ExclusiveArch: %{efi}
- efivar
ExclusiveArch: %{efi}
- elasticdump
ExclusiveArch: %{ix86} x86_64 %{arm} noarch
ExclusiveArch: %{nodejs_arches} noarch
- elk
ExclusiveArch: x86_64 %{ix86}
ExclusiveArch: x86_64 %{ix86} aarch64 %{arm} %{power64}
- embree
ExclusiveArch: x86_64
- enki
ExclusiveArch: %{qt5_qtwebengine_arches} noarch
- envytools
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64
- eric
ExclusiveArch: %{qt5_qtwebengine_arches} noarch
- exciting
ExclusiveArch: x86_64 %{ix86}
ExclusiveArch: x86_64 %{ix86} aarch64 %{power64}
ExclusiveArch: x86_64 %{ix86} aarch64 %{arm} %{power64}
- extlinux-bootloader
ExclusiveArch: %{arm} aarch64
- fcitx-libpinyin
ExclusiveArch: %{qt5_qtwebengine_arches}
- fedora-dockerfiles
ExclusiveArch: %{go_arches}
- fes
ExclusiveArch: %{ix86} x86_64
- flannel
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 ppc64le s390x
- florist
ExclusiveArch: %{GPRbuild_arches}
- fluxcapacitor
ExclusiveArch: %{ix86} x86_64 %{arm}
- fpc
ExclusiveArch: %{arm} aarch64 %{ix86} x86_64 ppc64le
- frescobaldi
ExclusiveArch: %{qt5_qtwebengine_arches}
- frysk
ExclusiveArch: %{ix86} x86_64 ppc64
- fst
ExclusiveArch: i686
- fwts
ExclusiveArch: x86_64 %{arm} aarch64 s390x %{power64}
- ga
ExclusiveArch: %{ix86} x86_64
- gbrainy
ExclusiveArch: %mono_arches
- gdata-sharp
ExclusiveArch: %mono_arches
- gdb-exploitable
ExclusiveArch: x86_64 i386
ExclusiveArch: x86_64 noarch
- gela-asis
ExclusiveArch: %GPRbuild_arches
- ghdl
ExclusiveArch: %{GNAT_arches}
- ghostwriter
ExclusiveArch: %{qt5_qtwebengine_arches}
- gio-sharp
ExclusiveArch: %mono_arches
- gir-to-d
ExclusiveArch: %{ldc_arches}
- git-octopus
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 aarch64 %{arm}}
- giver
ExclusiveArch: %{mono_arches}
- gkeyfile-sharp
ExclusiveArch: %mono_arches
- glibc32
ExclusiveArch: x86_64
- glibd
ExclusiveArch: %{ldc_arches}
- gmqcc
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64
- gnatcoll
ExclusiveArch: %{GPRbuild_arches}
- gnatcoll-bindings
ExclusiveArch: %{GPRbuild_arches}
- gnatcoll-db
ExclusiveArch: %{GPRbuild_arches}
- gnome-boxes
ExclusiveArch: x86_64
- gnome-desktop-sharp
ExclusiveArch: %mono_arches
- gnome-do
ExclusiveArch: %mono_arches
- gnome-guitar
ExclusiveArch: %{mono_arches}
- gnome-keyring-sharp
ExclusiveArch: %mono_arches
- gnome-rdp
ExclusiveArch: %{mono_arches}
- gnome-sharp
ExclusiveArch: %mono_arches
- gnome-subtitles
ExclusiveArch: %mono_arches
- gnu-efi
ExclusiveArch: %{efi}
- go-bindata
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 %{arm}}
- go-compilers
ExclusiveArch: %{go_arches}
- go-rpm-macros
ExclusiveArch: %{golang_arches} %{gccgo_arches}
- godep
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 %{arm}}
- golang
ExclusiveArch: %{golang_arches}
- gomtree
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 %{arm}}
- gotun
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 %{arm}}
ExclusiveArch: x86_64
- gprbuild
ExclusiveArch: %{GPRbuild_arches} %{bootstrap_arch}
- gprolog
ExclusiveArch: x86_64 %{ix86} ppc alpha
- grafana
ExclusiveArch: %{grafana_arches}
- grafana-pcp
ExclusiveArch: %{nodejs_arches}
- gtk-sharp-beans
ExclusiveArch: %mono_arches
- gtk-sharp2
ExclusiveArch: %mono_arches
- gtk-sharp3
ExclusiveArch: %{mono_arches}
- gtkd
ExclusiveArch: %{ldc_arches}
- gudev-sharp
ExclusiveArch: %mono_arches
- hcc
ExclusiveArch: x86_64 aarch64
- hedgewars
ExclusiveArch: %{fpc_arches}
- heketi
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 %{arm}}
- hip
ExclusiveArch: x86_64
- hsakmt
ExclusiveArch: x86_64 aarch64
- hyena
ExclusiveArch: %{mono_arches}
- hyperscan
ExclusiveArch: x86_64
- hyperv-daemons
ExclusiveArch: i686 x86_64
- i3status-rs
ExclusiveArch: %{rust_arches}
- icaro
ExclusiveArch: %{ix86} x86_64 noarch
- ikona
ExclusiveArch: %{qt5_qtwebengine_arches}
- imvirt
ExclusiveArch: %{ix86} x86_64 ia64
- indistarter
ExclusiveArch: %{fpc_arches}
- infinipath-psm
ExclusiveArch: x86_64
- insect
ExclusiveArch: %{nodejs_arches} noarch
- intel-cmt-cat
ExclusiveArch: x86_64 i686 i586
ExclusiveArch: x86_64 i686 i586
- intel-gmmlib
ExclusiveArch: x86_64 i686
- intel-mediasdk
ExclusiveArch: x86_64
- intel-undervolt
ExclusiveArch: i386 x86_64
- ioport
ExclusiveArch: %{ix86} x86_64
- ipmctl
ExclusiveArch: x86_64
- ipw2100-firmware
ExclusiveArch: noarch i386 x86_64
- ipw2200-firmware
ExclusiveArch: noarch i386 x86_64
- ispc
ExclusiveArch: %{arm} %{ix86} x86_64
- iucode-tool
ExclusiveArch: %{ix86} x86_64
- jake
ExclusiveArch: %{nodejs_arches} noarch
- jasmine-node
ExclusiveArch: %{nodejs_arches} noarch
ExclusiveArch: %{ix86} x86_64 %{arm} noarch
- java-1.8.0-openjdk-aarch32
ExclusiveArch: %{arm}
- josm
ExclusiveArch: %{ix86} x86_64
- keepass
ExclusiveArch: %{mono_arches}
- kernel
ExclusiveArch: x86_64 s390x %{arm} aarch64 ppc64le
ExclusiveArch: noarch i386 i686 x86_64 s390x %{arm} aarch64 ppc64le
- kf5-akonadi-calendar
ExclusiveArch: x86_64 %{arm}
- kf5-akonadi-search
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-kalarmcal
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-kblog
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-kcalendarcore
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-kcalendarutils
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-kitinerary
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-kmailtransport
ExclusiveArch: x86_64 %{arm}
- kf5-ktnef
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-libgravatar
ExclusiveArch: x86_64 %{arm}
- kf5-libkdcraw
ExclusiveArch: x86_64 ppc64le %{arm}
- kf5-libkdepim
ExclusiveArch: x86_64 %{arm}
- kf5-libksieve
ExclusiveArch: x86_64 %{arm}
- kf5-mailimporter
ExclusiveArch: x86_64 %{arm}
- kf5-pimcommon
ExclusiveArch: x86_64 %{arm}
- kicad
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 ppc64le
- kiwix-desktop
ExclusiveArch: %{qt5_qtwebengine_arches}
- knot-resolver
ExclusiveArch: %{ix86} x86_64
ExclusiveArch: %{arm} aarch64 %{ix86} x86_64
- knotes
ExclusiveArch: x86_64 %{arm}
- kompose
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 s390x
- kosmtik
ExclusiveArch: %{nodejs_arches} noarch
- kubernetes
ExclusiveArch: x86_64 aarch64 ppc64le s390x %{arm}
- lazarus
ExclusiveArch: %{fpc_arches}
- ldc
ExclusiveArch: %{ldc_arches}
- libbsr
ExclusiveArch: %{power64}
- libclc
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64 %{power64} s390x
- libcxl
ExclusiveArch: %{power64}
- libdfp
ExclusiveArch: ppc ppc64 ppc64le s390 s390x
- libica
ExclusiveArch: s390 s390x
- libipt
ExclusiveArch: %{ix86} x86_64
ExclusiveArch: %{ix86} x86_64
- libkgapi
ExclusiveArch: x86_64 %{arm}
- libocxl
ExclusiveArch: ppc64le
- libpmemobj-cpp
ExclusiveArch: x86_64
- libpsm2
ExclusiveArch: x86_64
- libquentier
ExclusiveArch: %{qt5_qtwebengine_arches}
- libretro-desmume2015
ExclusiveArch: i686 x86_64
- librtas
ExclusiveArch: %{power64}
- libservicelog
ExclusiveArch: ppc %{power64}
- libsmbios
ExclusiveArch: x86_64 %{ix86}
- libunwind
ExclusiveArch: %{arm} aarch64 hppa ia64 mips ppc %{power64} %{ix86} x86_64
- libva-intel-hybrid-driver
ExclusiveArch: %{ix86} x86_64 ia64
- libvmi
ExclusiveArch: x86_64
- libvpd
ExclusiveArch: %{power64}
- libxsmm
ExclusiveArch: x86_64
- libzfcphbaapi
ExclusiveArch: s390 s390x
- lightdm
ExclusiveArch: x86_64 ppc64le
- lodash
ExclusiveArch: %{nodejs_arches} noarch
- log4net
ExclusiveArch: %mono_arches
- lrmi
ExclusiveArch: %{ix86}
- lsvpd
ExclusiveArch: %{power64}
- luajit
ExclusiveArch: %{arm} %{ix86} x86_64 %{mips} aarch64 s390x ppc64le
- luxcorerender
ExclusiveArch: x86_64
- mactel-boot
ExclusiveArch: x86_64
- manifest-tool
ExclusiveArch: x86_64 aarch64 ppc64le s390x
- mantle
ExclusiveArch: %{?go_arches:%{go_arches}}%{!?go_arches:%{ix86} x86_64 aarch64 %{arm}}
- marked
ExclusiveArch: %{nodejs_arches} noarch
ExclusiveArch: %{ix86} x86_64 %{arm} noarch
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ExclusiveArch: %mono_arches
- themonospot-gui-gtk
ExclusiveArch: %mono_arches
- themonospot-plugin-avi
ExclusiveArch: %mono_arches
- themonospot-plugin-mkv
ExclusiveArch: %mono_arches
- thermald
ExclusiveArch: %{ix86} x86_64
- tilix
ExclusiveArch: %{ldc_arches}
- tmux-top
ExclusiveArch: %{go_arches}
- tomboy
ExclusiveArch: %{mono_arches}
- toolbox
ExclusiveArch: aarch64 %{arm} ppc64le s390x x86_64
- tuned-profiles-nfv-host-bin
ExclusiveArch: %{ix86} x86_64
- uClibc
ExclusiveArch: %{arm} %{ix86} x86_64 %{mips}
- ucx
ExclusiveArch: aarch64 ppc64le x86_64
- ugene
ExclusiveArch: %{ix86} x86_64
- uglify-js
ExclusiveArch: %{nodejs_arches} noarch
- uglify-js1
ExclusiveArch: %{nodejs_arches} noarch
ExclusiveArch: %{ix86} x86_64 %{arm} noarch
- unetbootin
ExclusiveArch: %{ix86} x86_64
- ursa-major
ExclusiveArch: %{ix86} x86_64 noarch
- v8-314
ExclusiveArch: %{ix86} x86_64 %{arm} mips mipsel ppc ppc64
- valgrind
ExclusiveArch: %{ix86} x86_64 ppc ppc64 ppc64le s390x armv7hl aarch64
- vboot-utils
ExclusiveArch: %{arm} aarch64 %{ix86} x86_64
- vim-go
ExclusiveArch: %{?golang_arches}%{!?golang_arches:%{ix86} x86_64 %{arm}}
- virt-p2v
ExclusiveArch: x86_64
- virtualbox-guest-additions
ExclusiveArch: i686 x86_64
- virtualplanet
ExclusiveArch: %{fpc_arches}
- vkd3d
ExclusiveArch: %{ix86} x86_64 %{arm}
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64
- vmaf
ExclusiveArch: x86_64
- vmem
ExclusiveArch: x86_64
- vmemcache
ExclusiveArch: x86_64 ppc64 ppc64le s390x aarch64
- vrq
ExclusiveArch: %{ix86} x86_64
- warsow
ExclusiveArch: %{ix86} x86_64 %{arm}
- warsow-data
ExclusiveArch: %{ix86} x86_64 %{arm} noarch
ExclusiveArch: %{ix86} x86_64 %{arm}
- webkit2-sharp
ExclusiveArch: %mono_arches
- wine
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64
ExclusiveArch: %{ix86} %{arm}
- wine-dxvk
ExclusiveArch: %{ix86} x86_64
- winetricks
ExclusiveArch: %{ix86} x86_64 %{arm} aarch64
- wxMaxima
ExclusiveArch: %{arm} %{ix86} x86_64 aarch64 ppc sparcv9
- x2goclient
ExclusiveArch: x86_64
- xe-guest-utilities-latest
ExclusiveArch: %{ix86} x86_64
- xen
ExclusiveArch: %{ix86} x86_64 armv7hl aarch64
- xmlada
ExclusiveArch: %{GPRbuild_arches}
- xorg-x11-drv-armsoc
ExclusiveArch: %{arm} aarch64
- xorg-x11-drv-intel
ExclusiveArch: %{ix86} x86_64
- xorg-x11-drv-openchrome
ExclusiveArch: %{ix86} x86_64
- xorg-x11-drv-vesa
ExclusiveArch: %{ix86} x86_64
- xorg-x11-drv-vmware
ExclusiveArch: %{ix86} x86_64 ia64
- xsp
ExclusiveArch: %mono_arches
- ycssmin
ExclusiveArch: %{nodejs_arches} noarch
- zeromq-ada
ExclusiveArch: %{GPRbuild_arches}
- zlib-ada
ExclusiveArch: %{GPRbuild_arches}
- zola
ExclusiveArch: %{rust_arches}
1
0
28 Feb '20
The package rpms/sagemath.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/sagemath.git/commit/?id=042a67aa713….
Change:
+ExclusiveArch: aarch64 %{ix86} x86_64 ppc sparcv9
Thanks.
Full change:
============
commit 042a67aa713de52630839f9158d7e3d41ea39b0f
Author: Jerry James <loganjerry(a)gmail.com>
Date: Fri Feb 28 14:51:18 2020 -0700
Do not build for 32-bit ARM, which is unable to unpack the source
RPM without running out of memory.
diff --git a/sagemath.spec b/sagemath.spec
index d456da1..236cea4 100644
--- a/sagemath.spec
+++ b/sagemath.spec
@@ -100,8 +100,10 @@ URL: http://www.sagemath.org
Source0: http://files.sagemath.org/src/sage-%{version}.tar.gz
Source1: https://github.com/JohnCremona/ecdata/archive/%{cremona_ver}/cremona-%{crem…
Source2: gprc.expect
-# Follow maxima's ExclusiveArch
-ExclusiveArch: aarch64 %{arm} %{ix86} x86_64 ppc sparcv9
+# Follow maxima's ExclusiveArch, except exclude 32-bit ARM. The source RPM is
+# now about 2GB in size. The 32-bit ARM builders run out of memory trying to
+# create the SRPM and also trying to unpack the SRPM before starting a build.
+ExclusiveArch: aarch64 %{ix86} x86_64 ppc sparcv9
# Fix stray escapes in python strings
Patch0: %{name}-escape.patch
@@ -1808,6 +1810,8 @@ rm -fr %{SAGE_LOCAL}/var/lib/sage/installed/database_cremona_ellcurve-%{cremona_
- New -jupyter subpackage
- Add suitesparse BR
- Drop pathlib2 BR (bz 1797116)
+- Do not build for 32-bit ARM, which is unable to unpack the source RPM without
+ running out of memory
* Thu Jan 30 2020 Fedora Release Engineering <releng(a)fedoraproject.org> - 8.9-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
commit 2fac77555255bfb0106c7ba353f5ed63187c5f29
Author: Jerry James <loganjerry(a)gmail.com>
Date: Fri Feb 28 09:38:49 2020 -0700
Version 9.0 (bz 1756780, 1770880).
Also:
- Drop upstreamed -ecm and -primecount patches.
- Add -escape patch.
- The old notebook (sagenb) is no longer shipped, so drop the -sagenb
and -sagenb-python3 patches, the -notebook subpackage, and some BRs.
- New -jupyter subpackage.
- Add suitesparse BR.
- Drop pathlib2 BR (bz 1797116).
diff --git a/sagemath-ecm.patch b/sagemath-ecm.patch
deleted file mode 100644
index 3857cbe..0000000
--- a/sagemath-ecm.patch
+++ /dev/null
@@ -1,21 +0,0 @@
-diff -up src/sage/interfaces/ecm.py.orig src/sage/interfaces/ecm.py
---- src/sage/interfaces/ecm.py.orig 2019-06-26 14:41:04.000000000 -0600
-+++ src/sage/interfaces/ecm.py 2019-09-04 09:29:09.529723744 -0600
-@@ -39,7 +39,7 @@ from __future__ import print_function
-
- from six import iteritems, PY2
-
--import os
-+import subprocess
- import re
-
- from sage.structure.sage_object import SageObject
-@@ -256,7 +256,7 @@ class ECM(SageObject):
- """
- print("Enter numbers to run ECM on them.")
- print("Press control-C to exit.")
-- os.system(self._cmd)
-+ subprocess.call(self._cmd)
-
- # Recommended settings from
- # http://www.mersennewiki.org/index.php/Elliptic_Curve_Method
diff --git a/sagemath-env.patch b/sagemath-env.patch
index b798986..035b659 100644
--- a/sagemath-env.patch
+++ b/sagemath-env.patch
@@ -1,6 +1,6 @@
diff -up src/sage/env.py.orig src/sage/env.py
---- src/sage/env.py.orig 2019-10-03 16:59:18.202495553 -0300
-+++ src/sage/env.py 2019-10-03 17:00:31.167931299 -0300
+--- src/sage/env.py.orig 2020-02-27 16:09:10.913012356 -0700
++++ src/sage/env.py 2020-02-27 16:16:34.080052271 -0700
@@ -151,11 +151,11 @@ var('SAGE_DATE', version.date)
var('SAGE_VERSION_BANNER', version.banner)
@@ -27,11 +27,15 @@ diff -up src/sage/env.py.orig src/sage/env.py
var('CONWAY_POLYNOMIALS_DATA_DIR', join(SAGE_SHARE, 'conway_polynomials'))
var('GRAPHS_DATA_DIR', join(SAGE_SHARE, 'graphs'))
var('ELLCURVE_DATA_DIR', join(SAGE_SHARE, 'ellcurves'))
-@@ -181,11 +181,11 @@ var('CREMONA_MINI_DATA_DIR', joi
+@@ -179,13 +179,13 @@ var('THEBE_DIR', joi
+ var('COMBINATORIAL_DESIGN_DATA_DIR', join(SAGE_SHARE, 'combinatorial_designs'))
+ var('CREMONA_MINI_DATA_DIR', join(SAGE_SHARE, 'cremona'))
var('CREMONA_LARGE_DATA_DIR', join(SAGE_SHARE, 'cremona'))
- var('JMOL_DIR', join(SAGE_SHARE, 'jmol'))
- var('JSMOL_DIR', join(SAGE_SHARE, 'jsmol'))
+-var('JMOL_DIR', join(SAGE_SHARE, 'jmol'))
+-var('JSMOL_DIR', join(SAGE_SHARE, 'jsmol'))
-var('MATHJAX_DIR', join(SAGE_SHARE, 'mathjax'))
++var('JMOL_DIR', join('/usr', 'share', 'java', 'jmol'))
++var('JSMOL_DIR', join('/usr', 'share', 'javascript', 'jsmol'))
+var('MATHJAX_DIR', join('/usr', 'share', 'javascript', 'mathjax'))
var('MTXLIB', join(SAGE_SHARE, 'meataxe'))
var('THREEJS_DIR', join(SAGE_SHARE, 'threejs'))
diff --git a/sagemath-escape.patch b/sagemath-escape.patch
new file mode 100644
index 0000000..8c73a7a
--- /dev/null
+++ b/sagemath-escape.patch
@@ -0,0 +1,3536 @@
+diff -up build/pkgs/ipython/src/IPython/core/completer.py.orig build/pkgs/ipython/src/IPython/core/completer.py
+--- build/pkgs/ipython/src/IPython/core/completer.py.orig 2018-07-28 18:24:17.000000000 -0600
++++ build/pkgs/ipython/src/IPython/core/completer.py 2020-02-26 11:30:50.639306162 -0700
+@@ -771,7 +771,7 @@ class IPCompleter(Completer):
+ return matches
+
+ def _default_arguments_from_docstring(self, doc):
+- """Parse the first line of docstring for call signature.
++ r"""Parse the first line of docstring for call signature.
+
+ Docstring should be of the form 'min(iterable[, key=func])\n'.
+ It can also parse cython docstring of the form
+@@ -939,7 +939,7 @@ class IPCompleter(Completer):
+ $
+ '''
+ regexps = self.__dict_key_regexps = {
+- False: re.compile(dict_key_re_fmt % '''
++ False: re.compile(dict_key_re_fmt % r'''
+ # identifiers separated by .
+ (?!\d)\w+
+ (?:\.(?!\d)\w+)*
+diff -up build/pkgs/ipython/src/IPython/core/inputtransformer.py.orig build/pkgs/ipython/src/IPython/core/inputtransformer.py
+--- build/pkgs/ipython/src/IPython/core/inputtransformer.py.orig 2018-07-28 18:24:17.000000000 -0600
++++ build/pkgs/ipython/src/IPython/core/inputtransformer.py 2020-02-26 11:25:31.587048803 -0700
+@@ -178,7 +178,7 @@ class assemble_python_lines(TokenInputTr
+
+ @CoroutineInputTransformer.wrap
+ def assemble_logical_lines():
+- """Join lines following explicit line continuations (\)"""
++ r"""Join lines following explicit line continuations (\)"""
+ line = ''
+ while True:
+ line = (yield line)
+@@ -362,7 +362,7 @@ def cellmagic(end_on_blank_line=False):
+ reset (sent None).
+ """
+ tpl = 'get_ipython().run_cell_magic(%r, %r, %r)'
+- cellmagic_help_re = re.compile('%%\w+\?')
++ cellmagic_help_re = re.compile(r'%%\w+\?')
+ line = ''
+ while True:
+ line = (yield line)
+diff -up build/pkgs/ipython/src/IPython/core/magics/config.py.orig build/pkgs/ipython/src/IPython/core/magics/config.py
+--- build/pkgs/ipython/src/IPython/core/magics/config.py.orig 2018-07-28 18:24:17.000000000 -0600
++++ build/pkgs/ipython/src/IPython/core/magics/config.py 2020-02-26 11:00:14.674896818 -0700
+@@ -26,7 +26,7 @@ from logging import error
+ # Magic implementation classes
+ #-----------------------------------------------------------------------------
+
+-reg = re.compile('^\w+\.\w+$')
++reg = re.compile(r'^\w+\.\w+$')
+ @magics_class
+ class ConfigMagics(Magics):
+
+diff -up build/pkgs/ipython/src/IPython/core/splitinput.py.orig build/pkgs/ipython/src/IPython/core/splitinput.py
+--- build/pkgs/ipython/src/IPython/core/splitinput.py.orig 2018-07-28 18:24:17.000000000 -0600
++++ build/pkgs/ipython/src/IPython/core/splitinput.py 2020-02-26 10:58:24.452965715 -0700
+@@ -41,7 +41,7 @@ from IPython.utils.encoding import get_s
+ # ! and !! trigger if they are first char(s) *or* follow an indent
+ # ? triggers as first or last char.
+
+-line_split = re.compile("""
++line_split = re.compile(r"""
+ ^(\s*) # any leading space
+ ([,;/%]|!!?|\?\??)? # escape character or characters
+ \s*(%{0,2}[\w\.\*]*) # function/method, possibly with leading %
+diff -up build/pkgs/ipython/src/IPython/utils/text.py.orig build/pkgs/ipython/src/IPython/utils/text.py
+--- build/pkgs/ipython/src/IPython/utils/text.py.orig 2018-07-28 18:24:17.000000000 -0600
++++ build/pkgs/ipython/src/IPython/utils/text.py 2020-02-26 11:02:58.842051890 -0700
+@@ -594,7 +594,7 @@ class DollarFormatter(FullEvalFormatter)
+ In [4]: f.format('$a or {b}', a=1, b=2)
+ Out[4]: u'1 or 2'
+ """
+- _dollar_pattern = re.compile("(.*?)\$(\$?[\w\.]+)")
++ _dollar_pattern = re.compile(r"(.*?)\$(\$?[\w\.]+)")
+ def parse(self, fmt_string):
+ for literal_txt, field_name, format_spec, conversion \
+ in Formatter.parse(self, fmt_string):
+diff -up build/pkgs/ipython/src/IPython/utils/_tokenize_py3.py.orig build/pkgs/ipython/src/IPython/utils/_tokenize_py3.py
+--- build/pkgs/ipython/src/IPython/utils/_tokenize_py3.py.orig 2018-07-28 18:24:17.000000000 -0600
++++ build/pkgs/ipython/src/IPython/utils/_tokenize_py3.py 2020-02-26 11:04:04.592962168 -0700
+@@ -47,7 +47,7 @@ from token import *
+ from codecs import lookup, BOM_UTF8
+ import collections
+ from io import TextIOWrapper
+-cookie_re = re.compile("coding[:=]\s*([-\w.]+)")
++cookie_re = re.compile(r"coding[:=]\s*([-\w.]+)")
+
+ import token
+ __all__ = token.__all__ + ["COMMENT", "tokenize", "detect_encoding",
+diff -up src/sage/algebras/letterplace/free_algebra_element_letterplace.pyx.orig src/sage/algebras/letterplace/free_algebra_element_letterplace.pyx
+--- src/sage/algebras/letterplace/free_algebra_element_letterplace.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/algebras/letterplace/free_algebra_element_letterplace.pyx 2020-02-27 12:06:28.748195247 -0700
+@@ -228,7 +228,7 @@ cdef class FreeAlgebraElement_letterplac
+ return '0'
+
+ def _latex_(self):
+- """
++ r"""
+ TESTS::
+
+ sage: K.<z> = GF(25)
+diff -up src/sage/algebras/letterplace/free_algebra_letterplace.pyx.orig src/sage/algebras/letterplace/free_algebra_letterplace.pyx
+--- src/sage/algebras/letterplace/free_algebra_letterplace.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/algebras/letterplace/free_algebra_letterplace.pyx 2020-02-27 12:07:22.658260237 -0700
+@@ -605,7 +605,7 @@ cdef class FreeAlgebra_letterplace(Algeb
+
+ # Auxiliar methods
+ cdef str exponents_to_latex(self, E):
+- """
++ r"""
+ This auxiliary method is used for the representation of elements of this free algebra as a latex string.
+
+ EXAMPLES::
+diff -up src/sage/algebras/lie_algebras/lie_algebra_element.pyx.orig src/sage/algebras/lie_algebras/lie_algebra_element.pyx
+--- src/sage/algebras/lie_algebras/lie_algebra_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/algebras/lie_algebras/lie_algebra_element.pyx 2020-02-27 12:05:08.435588192 -0700
+@@ -1014,7 +1014,7 @@ cdef class UntwistedAffineLieAlgebraElem
+ + (E_{-\alpha_{1}}) \otimes t^{1} + 3 c + -2 d
+ """
+ from sage.misc.latex import latex
+- ret = ' + '.join('({}) \otimes t^{{{}}}'.format(latex(g), t)
++ ret = ' + '.join(r'({}) \otimes t^{{{}}}'.format(latex(g), t)
+ for t,g in self._t_dict.iteritems())
+ if self._c_coeff != 0:
+ if ret:
+diff -up src/sage/arith/multi_modular.pyx.orig src/sage/arith/multi_modular.pyx
+--- src/sage/arith/multi_modular.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/arith/multi_modular.pyx 2020-02-27 13:55:34.962395106 -0700
+@@ -678,7 +678,7 @@ cdef class MultiModularBasis_base(object
+ return z
+
+ def precomputation_list(self):
+- """
++ r"""
+ Return a list of the precomputed coefficients
+ `\prod_j=1^{i-1} m_j^{-1} (mod m_i)`
+ where `m_i` are the prime moduli.
+diff -up src/sage/calculus/transforms/dwt.pyx.orig src/sage/calculus/transforms/dwt.pyx
+--- src/sage/calculus/transforms/dwt.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/calculus/transforms/dwt.pyx 2020-02-27 11:58:48.129134391 -0700
+@@ -24,7 +24,7 @@ AUTHOR:
+ import sage.plot.all
+
+ def WaveletTransform(n, wavelet_type, wavelet_k):
+- """
++ r"""
+ This function initializes an GSLDoubleArray of length n which
+ can perform a discrete wavelet transform.
+
+diff -up src/sage/coding/binary_code.pyx.orig src/sage/coding/binary_code.pyx
+--- src/sage/coding/binary_code.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/coding/binary_code.pyx 2020-02-27 09:13:10.902461428 -0700
+@@ -517,7 +517,7 @@ cdef codeword permute_word_by_wp(WordPer
+ return image
+
+ def test_expand_to_ortho_basis(B=None):
+- """
++ r"""
+ This function is written in pure C for speed, and is tested from this
+ function.
+
+diff -up src/sage/coding/codecan/codecan.pyx.orig src/sage/coding/codecan/codecan.pyx
+--- src/sage/coding/codecan/codecan.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/coding/codecan/codecan.pyx 2020-02-27 09:11:00.997860689 -0700
+@@ -369,7 +369,7 @@ cdef class InnerGroup:
+ return self.transporter
+
+ def __repr__(self):
+- """
++ r"""
+ EXAMPLES::
+
+ sage: from sage.coding.codecan.codecan import InnerGroup
+@@ -378,7 +378,7 @@ cdef class InnerGroup:
+ frobenius power = 1 and partition = 0 -> 0 1 -> 1 2 -> 2 3 -> 3 4 -> 4 5 -> 5
+ 6 -> 6 7 -> 7 8 -> 8 9 -> 9
+ """
+- return "Subgroup of (GL(k,q) times \GF{q}^n ) rtimes Aut(\GF{q}) " + \
++ return r"Subgroup of (GL(k,q) times \GF{q}^n ) rtimes Aut(\GF{q}) " + \
+ "with rank = %s, frobenius power = %s and partition =%s" % (self.rank,
+ self.frob_pow, OP_string(self.row_partition))
+
+@@ -741,7 +741,7 @@ cdef class PartitionRefinementLinearCode
+ return self._inner_group_stabilizer_order
+
+ cdef _init_point_hyperplane_incidence(self):
+- """
++ r"""
+ Compute a set of codewords `W` of `C` (generated by self) which is compatible
+ with the group action, i.e. if we start with some other code `(g,\pi)C`
+ the result should be `(g,\pi)W`.
+diff -up src/sage/combinat/crystals/letters.pyx.orig src/sage/combinat/crystals/letters.pyx
+--- src/sage/combinat/crystals/letters.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/crystals/letters.pyx 2020-02-27 13:38:25.079626805 -0700
+@@ -510,7 +510,7 @@ cdef class Letter(Element):
+ return False
+
+ cdef class EmptyLetter(Element):
+- """
++ r"""
+ The affine letter `\emptyset` thought of as a classical crystal letter
+ in classical type `B_n` and `C_n`.
+
+@@ -558,7 +558,7 @@ cdef class EmptyLetter(Element):
+ return 'E'
+
+ def _latex_(self):
+- """
++ r"""
+ Return a latex representation of ``self``.
+
+ EXAMPLES::
+@@ -2493,7 +2493,7 @@ cdef class BKKLetter(Letter):
+ return ret
+
+ class CrystalOfBKKLetters(ClassicalCrystalOfLetters):
+- """
++ r"""
+ Crystal of letters for Benkart-Kang-Kashiwara supercrystals.
+
+ This implements the `\mathfrak{gl}(m|n)` crystal of
+diff -up src/sage/combinat/crystals/tensor_product_element.pyx.orig src/sage/combinat/crystals/tensor_product_element.pyx
+--- src/sage/combinat/crystals/tensor_product_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/crystals/tensor_product_element.pyx 2020-02-27 13:42:53.490900825 -0700
+@@ -145,8 +145,8 @@ cdef class TensorProductOfCrystalsElemen
+ """
+ from sage.misc.latex import latex
+ if self._parent.options.convention == "Kashiwara":
+- return ' \otimes '.join(latex(c) for c in reversed(self))
+- return ' \otimes '.join(latex(c) for c in self)
++ return r' \otimes '.join(latex(c) for c in reversed(self))
++ return r' \otimes '.join(latex(c) for c in self)
+
+ def _ascii_art_(self):
+ """
+@@ -1314,7 +1314,7 @@ cdef class CrystalOfBKKTableauxElement(T
+ return repr(self.to_tableau())
+
+ def _repr_diagram(self):
+- """
++ r"""
+ Return a string representation of ``self`` as a diagram.
+
+ EXAMPLES::
+diff -up src/sage/combinat/integer_lists/base.pyx.orig src/sage/combinat/integer_lists/base.pyx
+--- src/sage/combinat/integer_lists/base.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/integer_lists/base.pyx 2020-02-27 10:03:04.700544965 -0700
+@@ -269,7 +269,7 @@ cdef class IntegerListsBackend(object):
+
+
+ cdef class Envelope(object):
+- """
++ r"""
+ The (currently approximated) upper (lower) envelope of a function
+ under the specified constraints.
+
+@@ -523,7 +523,7 @@ cdef class Envelope(object):
+ return self.f_limit_start
+
+ def limit(self):
+- """
++ r"""
+ Return a bound on the limit of ``self``.
+
+ OUTPUT: a nonnegative integer or `\infty`
+diff -up src/sage/combinat/root_system/reflection_group_c.pyx.orig src/sage/combinat/root_system/reflection_group_c.pyx
+--- src/sage/combinat/root_system/reflection_group_c.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/root_system/reflection_group_c.pyx 2020-02-27 13:46:22.841188756 -0700
+@@ -459,7 +459,7 @@ cdef int first_descent_in_parabolic(Perm
+
+ cpdef PermutationGroupElement reduce_in_coset(PermutationGroupElement w, tuple S,
+ list parabolic, int N, bint right):
+- """
++ r"""
+ Return the minimal length coset representative of ``w`` of the parabolic
+ subgroup indexed by ``parabolic`` (with indices `\{0, \ldots, n\}`).
+
+diff -up src/sage/combinat/root_system/reflection_group_element.pyx.orig src/sage/combinat/root_system/reflection_group_element.pyx
+--- src/sage/combinat/root_system/reflection_group_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/root_system/reflection_group_element.pyx 2020-02-27 10:05:47.567686763 -0700
+@@ -1109,7 +1109,7 @@ def _gap_factorization(w, gens):
+ fac = gap3('MinimalWord(W,%s)'%str(w)).sage()
+ return [i-1 for i in fac]
+
+-_gap_factorization_code = """
++_gap_factorization_code = r"""
+ # MinimalWord(G,w)
+ # given a permutation group G find some expression of minimal length in the
+ # generators of G and their inverses of the element w (an inverse is
+diff -up src/sage/crypto/boolean_function.pyx.orig src/sage/crypto/boolean_function.pyx
+--- src/sage/crypto/boolean_function.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/crypto/boolean_function.pyx 2020-02-27 09:07:31.088625609 -0700
+@@ -1108,7 +1108,7 @@ cdef class BooleanFunction(SageObject):
+ return (len(W) == 1) or (len(W) == 2 and 0 in W)
+
+ def is_linear_structure(self, val):
+- """
++ r"""
+ Return ``True`` if ``val`` is a linear structure of this Boolean
+ function.
+
+@@ -1178,7 +1178,7 @@ cdef class BooleanFunction(SageObject):
+ raise TypeError("cannot compute is_linear_structure() using parameter %s" % (val,))
+
+ def has_linear_structure(self):
+- """
++ r"""
+ Return ``True`` if this function has a linear structure.
+
+ An `n`-variable Boolean function `f` has a linear structure if
+@@ -1209,7 +1209,7 @@ cdef class BooleanFunction(SageObject):
+ return any(abs(a[i]) == 1<<nvars for i in range(1, 1<<nvars))
+
+ def linear_structures(self):
+- """
++ r"""
+ Return all linear structures of this Boolean function as a vector subspace
+ of `\GF{2}^n`.
+
+@@ -1240,7 +1240,7 @@ cdef class BooleanFunction(SageObject):
+ return V.subspace(l)
+
+ def derivative(self, u):
+- """
++ r"""
+ Return the derivative in direction of ``u``
+
+ INPUT:
+diff -up src/sage/functions/prime_pi.pyx.orig src/sage/functions/prime_pi.pyx
+--- src/sage/functions/prime_pi.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/functions/prime_pi.pyx 2020-02-27 13:57:13.458578944 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Counting Primes
+
+ AUTHORS:
+diff -up src/sage/geometry/integral_points.pyx.orig src/sage/geometry/integral_points.pyx
+--- src/sage/geometry/integral_points.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/geometry/integral_points.pyx 2020-02-27 14:58:09.110842685 -0700
+@@ -726,7 +726,7 @@ cdef loop_over_rectangular_box_points_sa
+
+
+ cdef class Inequality_generic:
+- """
++ r"""
+ An inequality whose coefficients are arbitrary Python/Sage objects
+
+ INPUT:
+@@ -839,7 +839,7 @@ cdef class Inequality_generic:
+ DEF INEQ_INT_MAX_DIM = 20
+
+ cdef class Inequality_int:
+- """
++ r"""
+ Fast version of inequality in the case that all coefficients fit
+ into machine ints.
+
+diff -up src/sage/graphs/asteroidal_triples.pyx.orig src/sage/graphs/asteroidal_triples.pyx
+--- src/sage/graphs/asteroidal_triples.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/asteroidal_triples.pyx 2020-02-27 09:53:16.680674877 -0700
+@@ -185,7 +185,7 @@ cdef list is_asteroidal_triple_free_C(ui
+ uint32_t** connected_structure,
+ uint32_t* waiting_list,
+ bitset_t seen):
+- """
++ r"""
+ INPUT:
+
+ - ``n`` -- integer; number of points in the graph
+diff -up src/sage/graphs/graph_decompositions/vertex_separation.pyx.orig src/sage/graphs/graph_decompositions/vertex_separation.pyx
+--- src/sage/graphs/graph_decompositions/vertex_separation.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/graph_decompositions/vertex_separation.pyx 2020-02-27 09:45:33.735327813 -0700
+@@ -472,7 +472,7 @@ def linear_ordering_to_path_decompositio
+
+ def pathwidth(self, k=None, certificate=False, algorithm="BAB", verbose=False,
+ max_prefix_length=20, max_prefix_number=10**6):
+- """
++ r"""
+ Compute the pathwidth of ``self`` (and provides a decomposition)
+
+ INPUT:
+diff -up src/sage/graphs/hyperbolicity.pyx.orig src/sage/graphs/hyperbolicity.pyx
+--- src/sage/graphs/hyperbolicity.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/hyperbolicity.pyx 2020-02-27 09:40:41.823526940 -0700
+@@ -585,7 +585,7 @@ cdef tuple hyperbolicity_BCCM(int N,
+ float approximation_factor,
+ float additive_gap,
+ verbose=False):
+- """
++ r"""
+ Return the hyperbolicity of a graph.
+
+ This method implements the exact and the approximate algorithms proposed in
+@@ -841,7 +841,7 @@ cdef tuple hyperbolicity_CCL(int N,
+ float approximation_factor,
+ float additive_gap,
+ verbose=False):
+- """
++ r"""
+ Return the hyperbolicity of a graph.
+
+ This method implements the exact and the approximate algorithms proposed in
+diff -up src/sage/graphs/matchpoly.pyx.orig src/sage/graphs/matchpoly.pyx
+--- src/sage/graphs/matchpoly.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/matchpoly.pyx 2020-02-27 12:33:20.595046387 -0700
+@@ -50,7 +50,7 @@ x = polygen(ZZ, 'x')
+
+
+ def matching_polynomial(G, complement=True, name=None):
+- """
++ r"""
+ Computes the matching polynomial of the graph `G`.
+
+ If `p(G, k)` denotes the number of `k`-matchings (matchings with `k` edges)
+diff -up src/sage/graphs/strongly_regular_db.pyx.orig src/sage/graphs/strongly_regular_db.pyx
+--- src/sage/graphs/strongly_regular_db.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/strongly_regular_db.pyx 2020-02-27 09:51:17.877812212 -0700
+@@ -2391,7 +2391,7 @@ def strongly_regular_from_two_intersecti
+
+ A set of points in the projective geometry `PG(k,q)` is said to be a
+ 2-intersection set if it intersects every hyperplane in either `h_1` or
+- `h_2` points, where `h_1,h_2\in \\NN`.
++ `h_2` points, where `h_1,h_2\in \NN`.
+
+ From a 2-intersection set `S` can be defined a strongly-regular graph in the
+ following way:
+diff -up src/sage/groups/group.pyx.orig src/sage/groups/group.pyx
+--- src/sage/groups/group.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/groups/group.pyx 2020-02-27 11:36:32.459309482 -0700
+@@ -50,7 +50,7 @@ def is_Group(x):
+
+
+ cdef class Group(Parent):
+- """
++ r"""
+ Base class for all groups
+
+ TESTS::
+@@ -189,7 +189,7 @@ cdef class Group(Parent):
+ return self.order() != infinity
+
+ def is_multiplicative(self):
+- """
++ r"""
+ Returns True if the group operation is given by \* (rather than
+ +).
+
+diff -up src/sage/groups/perm_gps/partn_ref2/refinement_generic.pyx.orig src/sage/groups/perm_gps/partn_ref2/refinement_generic.pyx
+--- src/sage/groups/perm_gps/partn_ref2/refinement_generic.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/groups/perm_gps/partn_ref2/refinement_generic.pyx 2020-02-27 08:42:25.623470890 -0700
+@@ -913,7 +913,7 @@ cdef class PartitionRefinement_generic:
+ "\\begin{tikzpicture}\n" +
+ "\\tikzset{level distance=3cm, edge from parent/.style=" +
+ "{draw, edge from parent path={(\\tikzparentnode.south) -- (\\tikzchildnode.north)}}}\n" +
+- "\Tree")
++ "\\Tree")
+ self._latex_debug_string += "[."
+ self._latex_act_node()
+
+diff -up src/sage/groups/perm_gps/partn_ref/data_structures.pyx.orig src/sage/groups/perm_gps/partn_ref/data_structures.pyx
+--- src/sage/groups/perm_gps/partn_ref/data_structures.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/groups/perm_gps/partn_ref/data_structures.pyx 2020-02-27 11:31:41.434392986 -0700
+@@ -828,11 +828,11 @@ cdef SC_print_level(StabilizerChain *SC,
+ print('| labels {}'.format([SC.labels [level][i] for i from 0 <= i < n]))
+ print('|')
+ print('| generators {}'.format([[SC.generators [level][n*i + j] for j from 0 <= j < n] for i from 0 <= i < SC.num_gens[level]]))
+- print('\ inverses {}'.format([[SC.gen_inverses[level][n*i + j] for j from 0 <= j < n] for i from 0 <= i < SC.num_gens[level]]))
++ print('\\ inverses {}'.format([[SC.gen_inverses[level][n*i + j] for j from 0 <= j < n] for i from 0 <= i < SC.num_gens[level]]))
+ else:
+ print('/ level {}'.format(level))
+ print('|')
+- print('\ base_size {}'.format(SC.base_size))
++ print('\\ base_size {}'.format(SC.base_size))
+
+ cdef StabilizerChain *SC_new_base(StabilizerChain *SC, int *base, int base_len):
+ """
+diff -up src/sage/groups/perm_gps/partn_ref/refinement_binary.pyx.orig src/sage/groups/perm_gps/partn_ref/refinement_binary.pyx
+--- src/sage/groups/perm_gps/partn_ref/refinement_binary.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/groups/perm_gps/partn_ref/refinement_binary.pyx 2020-02-27 11:30:07.172039526 -0700
+@@ -105,7 +105,7 @@ cdef class LinearBinaryCodeStruct(Binary
+ self.ith_word = &ith_word_linear
+
+ def run(self, partition=None):
+- """
++ r"""
+ Perform the canonical labeling and automorphism group computation,
+ storing results to self.
+
+@@ -607,7 +607,7 @@ cdef int ith_word_nonlinear(BinaryCodeSt
+ return 0
+
+ cdef int refine_by_bip_degree(PartitionStack *col_ps, void *S, int *cells_to_refine_by, int ctrb_len):
+- """
++ r"""
+ Refines the input partition by checking degrees of vertices to the given
+ cells in the associated bipartite graph (vertices split into columns and
+ words).
+@@ -731,7 +731,7 @@ cdef int refine_by_bip_degree(PartitionS
+ return invariant
+
+ cdef int compare_linear_codes(int *gamma_1, int *gamma_2, void *S1, void *S2, int degree):
+- """
++ r"""
+ Compare gamma_1(S1) and gamma_2(S2).
+
+ Return return -1 if gamma_1(S1) < gamma_2(S2), 0 if gamma_1(S1) == gamma_2(S2),
+@@ -804,7 +804,7 @@ cdef int compare_linear_codes(int *gamma
+ return 0
+
+ cdef int compare_nonlinear_codes(int *gamma_1, int *gamma_2, void *S1, void *S2, int degree):
+- """
++ r"""
+ Compare gamma_1(S1) and gamma_2(S2).
+
+ Return return -1 if gamma_1(S1) < gamma_2(S2), 0 if gamma_1(S1) == gamma_2(S2),
+diff -up src/sage/groups/perm_gps/permgroup_element.pyx.orig src/sage/groups/perm_gps/permgroup_element.pyx
+--- src/sage/groups/perm_gps/permgroup_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/groups/perm_gps/permgroup_element.pyx 2020-02-27 11:35:14.696667810 -0700
+@@ -1064,7 +1064,7 @@ cdef class PermutationGroupElement(Multi
+ return y
+
+ cpdef _act_on_(self, x, bint self_on_left):
+- """
++ r"""
+ Return the right action of self on left.
+
+ For example, if f=left is a polynomial, then this function returns
+@@ -1498,7 +1498,7 @@ cdef class PermutationGroupElement(Multi
+ return ~self
+
+ def sign(self):
+- """
++ r"""
+ Returns the sign of self, which is `(-1)^{s}`, where
+ `s` is the number of swaps.
+
+@@ -1735,7 +1735,7 @@ cdef class PermutationGroupElement(Multi
+ return _Partitions(cycle_type)
+
+ def has_descent(self, i, side = "right", positive = False):
+- """
++ r"""
+ INPUT:
+
+ - ``i``: an element of the index set
+diff -up src/sage/groups/semimonomial_transformations/semimonomial_transformation.pyx.orig src/sage/groups/semimonomial_transformations/semimonomial_transformation.pyx
+--- src/sage/groups/semimonomial_transformations/semimonomial_transformation.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/groups/semimonomial_transformations/semimonomial_transformation.pyx 2020-02-27 08:47:01.774920139 -0700
+@@ -279,7 +279,7 @@ cdef class SemimonomialTransformation(Mu
+ return (self.parent(), (0, self.v, self.perm, self.get_autom()))
+
+ def get_v(self):
+- """
++ r"""
+ Returns the component corresponding to `{R^{\times}}^n` of ``self``.
+
+ EXAMPLES::
+@@ -291,7 +291,7 @@ cdef class SemimonomialTransformation(Mu
+ return self.v
+
+ def get_v_inverse(self):
+- """
++ r"""
+ Returns the (elementwise) inverse of the component corresponding to
+ `{R^{\times}}^n` of ``self``.
+
+@@ -328,7 +328,7 @@ cdef class SemimonomialTransformation(Mu
+ return self.alpha
+
+ def invert_v(self):
+- """
++ r"""
+ Elementwisely invert all entries of ``self`` which
+ correspond to the component `{R^{\times}}^n`.
+
+diff -up src/sage/libs/eclib/mwrank.pyx.orig src/sage/libs/eclib/mwrank.pyx
+--- src/sage/libs/eclib/mwrank.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/eclib/mwrank.pyx 2020-02-26 13:47:58.684086935 -0700
+@@ -333,7 +333,7 @@ cdef class _Curvedata: # cython class
+ return string_sigoff(Curvedata_repr(self.x))[:-1]
+
+ def silverman_bound(self):
+- """
++ r"""
+ The Silverman height bound for this elliptic curve.
+
+ OUTPUT:
+@@ -362,7 +362,7 @@ cdef class _Curvedata: # cython class
+ return Curvedata_silverman_bound(self.x)
+
+ def cps_bound(self):
+- """
++ r"""
+ The Cremona-Prickett-Siksek height bound for this elliptic curve.
+
+ OUTPUT:
+@@ -397,7 +397,7 @@ cdef class _Curvedata: # cython class
+ return x
+
+ def height_constant(self):
+- """
++ r"""
+ A height bound for this elliptic curve.
+
+ OUTPUT:
+@@ -512,7 +512,7 @@ cdef class _mw:
+ cdef int verb
+
+ def __init__(self, _Curvedata curve, verb=False, pp=1, maxr=999):
+- """
++ r"""
+ Constructor for mw class.
+
+ INPUT:
+@@ -904,7 +904,7 @@ cdef class _mw:
+ return ok, index, unsat
+
+ def search(self, h_lim, int moduli_option=0, int verb=0):
+- """
++ r"""
+ Search for points in the mw group.
+
+ INPUT:
+@@ -1261,7 +1261,7 @@ cdef class _two_descent:
+ sig_off()
+
+ def getbasis(self):
+- """
++ r"""
+ Returns the basis of points found by doing a 2-descent.
+
+ If the success and certain flags are 1, this will be a
+diff -up src/sage/libs/eclib/newforms.pyx.orig src/sage/libs/eclib/newforms.pyx
+--- src/sage/libs/eclib/newforms.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/eclib/newforms.pyx 2020-02-27 11:17:03.555393145 -0700
+@@ -22,7 +22,7 @@ from sage.modular.all import Cusp
+
+
+ cdef class ECModularSymbol:
+- """
++ r"""
+ Modular symbol associated with an elliptic curve, using John Cremona's newforms class.
+
+ EXAMPLES::
+diff -up src/sage/libs/fes.pyx.orig src/sage/libs/fes.pyx
+--- src/sage/libs/fes.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/fes.pyx 2020-02-27 15:31:37.911298615 -0700
+@@ -288,7 +288,7 @@ def find_coordinate_change(As, max_tries
+
+
+ def prepare_polynomials(f):
+- """
++ r"""
+ Finds a linear combination of the equations that is faster to solve by FES
+
+ INPUT:
+diff -up src/sage/libs/linkages/padics/API.pxi.orig src/sage/libs/linkages/padics/API.pxi
+--- src/sage/libs/linkages/padics/API.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/linkages/padics/API.pxi 2020-02-27 15:42:51.990640350 -0700
+@@ -469,7 +469,7 @@ cdef inline long chash(celement a, long
+
+ # the expansion_mode enum is defined in padic_template_element_header.pxi
+ cdef inline cexpansion_next(celement value, expansion_mode mode, long curpower, PowComputer_ prime_pow):
+- """
++ r"""
+ Return the next digit in a `\pi`-adic expansion of ``value``.
+
+ INPUT:
+@@ -483,7 +483,7 @@ cdef inline cexpansion_next(celement val
+ pass
+
+ cdef inline cexpansion_getitem(celement value, long m, PowComputer_ prime_pow):
+- """
++ r"""
+ Return the `m`th `\pi`-adic digit in the ``simple_mode`` expansion.
+
+ INPUT:
+@@ -512,7 +512,7 @@ cdef list ccoefficients(celement x, long
+ pass
+
+ cdef int cteichmuller(celement out, celement value, long prec, PowComputer_class prime_pow) except -1:
+- """
++ r"""
+ Teichmuller lifting.
+
+ INPUT:
+diff -up src/sage/libs/linkages/padics/fmpz_poly_unram.pxi.orig src/sage/libs/linkages/padics/fmpz_poly_unram.pxi
+--- src/sage/libs/linkages/padics/fmpz_poly_unram.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/linkages/padics/fmpz_poly_unram.pxi 2020-02-27 15:42:11.511401421 -0700
+@@ -659,7 +659,7 @@ cdef list ccoefficients(celement x, long
+ return ans
+
+ cdef int cteichmuller(celement out, celement value, long prec, PowComputer_ prime_pow) except -1:
+- """
++ r"""
+ Teichmuller lifting.
+
+ INPUT:
+@@ -838,7 +838,7 @@ cdef inline int cconv_mpz_t_out(mpz_t ou
+ ## Extra functions ##
+
+ cdef cmatrix_mod_pn(celement a, long aprec, long valshift, PowComputer_ prime_pow):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/libs/linkages/padics/mpz.pxi.orig src/sage/libs/linkages/padics/mpz.pxi
+--- src/sage/libs/linkages/padics/mpz.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/linkages/padics/mpz.pxi 2020-02-27 15:43:41.974700571 -0700
+@@ -567,7 +567,7 @@ cdef list ccoefficients(mpz_t x, long va
+ return [ansq]
+
+ cdef int cteichmuller(mpz_t out, mpz_t value, long prec, PowComputer_ prime_pow) except -1:
+- """
++ r"""
+ Teichmuller lifting.
+
+ INPUT:
+diff -up src/sage/libs/linkages/padics/unram_shared.pxi.orig src/sage/libs/linkages/padics/unram_shared.pxi
+--- src/sage/libs/linkages/padics/unram_shared.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/linkages/padics/unram_shared.pxi 2020-02-26 13:52:20.857135309 -0700
+@@ -70,7 +70,7 @@ def frobenius_unram(self, arithmetic=Tru
+
+ @cython.binding(True)
+ def norm_unram(self, base = None):
+- """
++ r"""
+ Return the absolute or relative norm of this element.
+
+ .. WARNING::
+@@ -151,7 +151,7 @@ def norm_unram(self, base = None):
+
+ @cython.binding(True)
+ def trace_unram(self, base = None):
+- """
++ r"""
+ Return the absolute or relative trace of this element.
+
+ If ``base`` is given then ``base`` must be a subfield of the
+diff -up src/sage/libs/ntl/ntl_GF2E.pyx.orig src/sage/libs/ntl/ntl_GF2E.pyx
+--- src/sage/libs/ntl/ntl_GF2E.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_GF2E.pyx 2020-02-27 15:36:28.211821169 -0700
+@@ -66,7 +66,7 @@ def ntl_GF2E_random(ntl_GF2EContext_clas
+
+ cdef class ntl_GF2E(object):
+ r"""
+- The \\class{GF2E} represents a finite extension field over GF(2)
++ The \class{GF2E} represents a finite extension field over GF(2)
+ using NTL. Elements are represented as polynomials over GF(2)
+ modulo a modulus.
+
+@@ -435,7 +435,7 @@ cdef class ntl_GF2E(object):
+ return l
+
+ def _sage_(ntl_GF2E self, k=None):
+- """
++ r"""
+ Returns a \class{FiniteFieldElement} representation
+ of this element. If a \class{FiniteField} k is provided
+ it is constructed in this field if possible. A \class{FiniteField}
+diff -up src/sage/libs/ntl/ntl_GF2X.pyx.orig src/sage/libs/ntl/ntl_GF2X.pyx
+--- src/sage/libs/ntl/ntl_GF2X.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_GF2X.pyx 2020-02-27 15:34:59.579465248 -0700
+@@ -480,7 +480,7 @@ cdef class ntl_GF2X(object):
+ return [self[i] for i in range(GF2X_deg(self.x)+1)]
+
+ def bin(ntl_GF2X self):
+- """
++ r"""
+ Returns binary representation of this element. It is
+ the same as setting \code{ntl.GF2XHexOutput(False)} and
+ representing this element afterwards. However it should be
+@@ -503,7 +503,7 @@ cdef class ntl_GF2X(object):
+ return s
+
+ def hex(ntl_GF2X self):
+- """
++ r"""
+ Return an hexadecimal representation of this element.
+
+ It is the same as setting \code{ntl.GF2XHexOutput(True)} and
+diff -up src/sage/libs/ntl/ntl_mat_GF2E.pyx.orig src/sage/libs/ntl/ntl_mat_GF2E.pyx
+--- src/sage/libs/ntl/ntl_mat_GF2E.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_mat_GF2E.pyx 2020-02-27 15:33:55.565652664 -0700
+@@ -174,7 +174,7 @@ cdef class ntl_mat_GF2E(object):
+ return unpickle_class_args, (ntl_mat_GF2E, (self.modulus_context(), self.x.NumRows(), self.x.NumCols(), self.list()))
+
+ def __repr__(self):
+- """
++ r"""
+ Return the string representation of self.
+
+ EXAMPLES::
+@@ -439,7 +439,7 @@ cdef class ntl_mat_GF2E(object):
+ return r
+
+ def gauss(self,ncols=-1):
+- """
++ r"""
+ Performs unitary row operations so as to bring this matrix
+ into row echelon form. If the optional argument \code{ncols}
+ is supplied, stops when first ncols columns are in echelon
+diff -up src/sage/libs/ntl/ntl_mat_GF2.pyx.orig src/sage/libs/ntl/ntl_mat_GF2.pyx
+--- src/sage/libs/ntl/ntl_mat_GF2.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_mat_GF2.pyx 2020-02-27 15:38:58.065038500 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Matrices over the $\GF{2}$ via NTL
+
+ This class is only provided to have a complete NTL interface and for
+@@ -427,7 +427,7 @@ cdef class ntl_mat_GF2(object):
+ return r
+
+ def gauss(self,ncols=-1):
+- """
++ r"""
+ Performs unitary row operations so as to bring this matrix
+ into row echelon form (not reduced!). If the optional
+ argument \code{ncols} is supplied, stops when first ncols
+@@ -591,7 +591,7 @@ cdef class ntl_mat_GF2(object):
+ return r
+
+ def __invert__(self):
+- """
++ r"""
+ Return $X = A^{-1}$; an error is raised if A is singular.
+
+ EXAMPLES::
+diff -up src/sage/libs/ntl/ntl_mat_ZZ.pyx.orig src/sage/libs/ntl/ntl_mat_ZZ.pyx
+--- src/sage/libs/ntl/ntl_mat_ZZ.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_mat_ZZ.pyx 2020-02-27 15:32:42.159053522 -0700
+@@ -66,7 +66,7 @@ cdef class ntl_mat_ZZ(object):
+ The \class{mat_ZZ} class implements arithmetic with matrices over $\Z$.
+ """
+ def __init__(self, nrows=0, ncols=0, v=None):
+- """
++ r"""
+ The \class{mat_ZZ} class implements arithmetic with matrices over $\Z$.
+
+ EXAMPLES::
+@@ -122,7 +122,7 @@ cdef class ntl_mat_ZZ(object):
+ return unpickle_class_args, (ntl_mat_ZZ, (self.__nrows, self.__ncols, self.list()))
+
+ def __repr__(self):
+- """
++ r"""
+ Return the string representation of self.
+
+ EXAMPLES::
+diff -up src/sage/libs/ntl/ntl_ZZ_pEX.pyx.orig src/sage/libs/ntl/ntl_ZZ_pEX.pyx
+--- src/sage/libs/ntl/ntl_ZZ_pEX.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_ZZ_pEX.pyx 2020-02-27 15:40:20.817482630 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Wrapper for NTL's polynomials over finite ring extensions of $\Z / p\Z.$
+
+ AUTHORS:
+diff -up src/sage/libs/ntl/ntl_ZZX.pyx.orig src/sage/libs/ntl/ntl_ZZX.pyx
+--- src/sage/libs/ntl/ntl_ZZX.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ntl/ntl_ZZX.pyx 2020-02-27 11:19:30.586809381 -0700
+@@ -688,7 +688,7 @@ cdef class ntl_ZZX(object):
+ return (self*other).quo_rem(g)[0]
+
+ def xgcd(self, ntl_ZZX other, proof=None):
+- """
++ r"""
+ If self and other are coprime over the rationals, return r, s,
+ t such that r = s*self + t*other. Otherwise return 0. This
+ is \emph{not} the same as the \sage function on polynomials
+diff -up src/sage/libs/ppl.pyx.orig src/sage/libs/ppl.pyx
+--- src/sage/libs/ppl.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ppl.pyx 2020-02-27 11:18:35.716773608 -0700
+@@ -5756,7 +5756,7 @@ cdef _make_Constraint_from_richcmp(lhs_,
+
+ ####################################################
+ cdef class Constraint(object):
+- """
++ r"""
+ Wrapper for PPL's ``Constraint`` class.
+
+ An object of the class ``Constraint`` is either:
+diff -up src/sage/libs/pynac/pynac.pyx.orig src/sage/libs/pynac/pynac.pyx
+--- src/sage/libs/pynac/pynac.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/pynac/pynac.pyx 2020-02-26 13:51:20.673271444 -0700
+@@ -385,7 +385,7 @@ cdef stdstring* string_from_pystr(py_str
+ return new stdstring(s)
+
+ cdef stdstring* py_latex_variable(var_name):
+- """
++ r"""
+ Returns a c++ string containing the latex representation of the given
+ variable name.
+
+@@ -414,7 +414,7 @@ cdef stdstring* py_latex_variable(var_na
+ return string_from_pystr(py_vlatex)
+
+ def py_latex_variable_for_doctests(x):
+- """
++ r"""
+ Internal function used so we can doctest a certain cdef'd method.
+
+ EXAMPLES::
+@@ -703,7 +703,7 @@ cdef stdstring* py_latex_fderivative(uns
+ operator_string=r"\frac{\partial^{%s}}{%s}"%(len(params),''.join(diff_args))
+ py_res = operator_string+py_latex_function_pystring(id,args,False)
+ else:
+- ostr = ''.join(['\mathrm{D}_{',', '.join([repr(int(x)) for x in params]), '}'])
++ ostr = ''.join([r'\mathrm{D}_{',', '.join([repr(int(x)) for x in params]), '}'])
+ fstr = py_latex_function_pystring(id, args, True)
+ py_res = ostr + fstr
+ return string_from_pystr(py_res)
+@@ -1164,7 +1164,7 @@ cdef bint py_is_crational(x):
+ return False
+
+ def py_is_crational_for_doctest(x):
+- """
++ r"""
+ Returns True if pynac should treat this object as an element of `\QQ(i)`.
+
+ TESTS::
+@@ -1304,7 +1304,7 @@ cdef bint py_is_cinteger(x):
+ return py_is_integer(x) or (py_is_crational(x) and py_denom(x) == 1)
+
+ def py_is_cinteger_for_doctest(x):
+- """
++ r"""
+ Returns True if pynac should treat this object as an element of `\ZZ(i)`.
+
+ TESTS::
+diff -up src/sage/libs/ratpoints.pyx.orig src/sage/libs/ratpoints.pyx
+--- src/sage/libs/ratpoints.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/ratpoints.pyx 2020-02-27 15:25:26.499254622 -0700
+@@ -42,7 +42,7 @@ cdef int process(long x, long z, mpz_t y
+
+ def ratpoints(list coeffs, long H, verbose=False, long max=0,
+ min_x_denom=None, max_x_denom=None, intervals=[]):
+- """
++ r"""
+ Access the ratpoints library to find points on the hyperelliptic curve:
+
+ `y^2 = a_n x^n + \cdots + a_1 x + a_0.`
+diff -up src/sage/libs/singular/polynomial.pyx.orig src/sage/libs/singular/polynomial.pyx
+--- src/sage/libs/singular/polynomial.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/singular/polynomial.pyx 2020-02-27 15:18:01.665479916 -0700
+@@ -22,7 +22,7 @@ cdef extern from *: # hack to get at cyt
+ int unlikely(int)
+
+ import re
+-plusminus_pattern = re.compile("([^\(^])([\+\-])")
++plusminus_pattern = re.compile(r"([^\(^])([\+\-])")
+
+ from sage.cpython.string cimport bytes_to_str, str_to_bytes
+
+diff -up src/sage/libs/symmetrica/sc.pxi.orig src/sage/libs/symmetrica/sc.pxi
+--- src/sage/libs/symmetrica/sc.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/symmetrica/sc.pxi 2020-02-26 10:48:22.217706792 -0700
+@@ -103,7 +103,7 @@ def charvalue_symmetrica(irred, cls, tab
+
+
+ def kranztafel_symmetrica(a, b):
+- """
++ r"""
+ you enter the INTEGER objects, say a and b, and res becomes a
+ MATRIX object, the charactertable of S_b \wr S_a, co becomes a
+ VECTOR object of classorders and cl becomes a VECTOR object of
+diff -up src/sage/matrix/matrix0.pyx.orig src/sage/matrix/matrix0.pyx
+--- src/sage/matrix/matrix0.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix0.pyx 2020-02-27 12:13:14.304142090 -0700
+@@ -2175,7 +2175,7 @@ cdef class Matrix(sage.structure.element
+ # Functions
+ ###################################################
+ def act_on_polynomial(self, f):
+- """
++ r"""
+ Returns the polynomial f(self\*x).
+
+ INPUT:
+@@ -2241,7 +2241,7 @@ cdef class Matrix(sage.structure.element
+ # Arithmetic
+ ###################################################
+ def commutator(self, other):
+- """
++ r"""
+ Return the commutator self\*other - other\*self.
+
+ EXAMPLES::
+@@ -4713,7 +4713,7 @@ cdef class Matrix(sage.structure.element
+ # Arithmetic
+ ###################################################
+ cdef _vector_times_matrix_(self, Vector v):
+- """
++ r"""
+ Returns the vector times matrix product.
+
+ INPUT:
+diff -up src/sage/matrix/matrix2.pyx.orig src/sage/matrix/matrix2.pyx
+--- src/sage/matrix/matrix2.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix2.pyx 2020-02-27 09:38:09.247266810 -0700
+@@ -6754,7 +6754,7 @@ cdef class Matrix(Matrix1):
+ raise NotImplementedError("%s\nEchelon form not implemented over '%s'."%(msg,self.base_ring()))
+
+ def echelon_form(self, algorithm="default", cutoff=0, **kwds):
+- """
++ r"""
+ Return the echelon form of self.
+
+ .. NOTE::
+@@ -8810,7 +8810,7 @@ cdef class Matrix(Matrix1):
+ return img
+
+ def density(self):
+- """
++ r"""
+ Return the density of the matrix.
+
+ By density we understand the ratio of the number of nonzero
+diff -up src/sage/matrix/matrix_gf2e_dense.pyx.orig src/sage/matrix/matrix_gf2e_dense.pyx
+--- src/sage/matrix/matrix_gf2e_dense.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_gf2e_dense.pyx 2020-02-27 12:14:38.189668697 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense matrices over `\GF{2^e}` for `2 <= e <= 10` using the M4RIE library.
+
+ The M4RIE library offers two matrix representations:
+@@ -502,7 +502,7 @@ cdef class Matrix_gf2e_dense(matrix_dens
+ return ans
+
+ cpdef Matrix_gf2e_dense _multiply_karatsuba(Matrix_gf2e_dense self, Matrix_gf2e_dense right):
+- """
++ r"""
+ Matrix multiplication using Karatsuba over polynomials with
+ matrix coefficients over GF(2).
+
+diff -up src/sage/matrix/matrix_integer_dense.pyx.orig src/sage/matrix/matrix_integer_dense.pyx
+--- src/sage/matrix/matrix_integer_dense.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_integer_dense.pyx 2020-02-27 09:28:59.795169737 -0700
+@@ -1011,7 +1011,7 @@ cdef class Matrix_integer_dense(Matrix_d
+
+ # TODO: Implement better
+ cdef _vector_times_matrix_(self, Vector v):
+- """
++ r"""
+ Returns the vector times matrix product.
+
+ INPUT:
+@@ -3948,7 +3948,7 @@ cdef class Matrix_integer_dense(Matrix_d
+ return M
+
+ def _invert_iml(self, use_nullspace=False, check_invertible=True):
+- """
++ r"""
+ Invert this matrix using IML. The output matrix is an integer
+ matrix and a denominator.
+
+@@ -4013,7 +4013,7 @@ cdef class Matrix_integer_dense(Matrix_d
+ return self._solve_iml(P.identity_matrix(), right=True)
+
+ def _invert_flint(self):
+- """
++ r"""
+ Invert this matrix using FLINT. The output matrix is an integer
+ matrix and a denominator.
+
+@@ -4299,7 +4299,7 @@ cdef class Matrix_integer_dense(Matrix_d
+ return X
+
+ def _solve_iml(self, Matrix_integer_dense B, right=True):
+- """
++ r"""
+ Let A equal self be a square matrix. Given B return an integer
+ matrix C and an integer d such that self C\*A == d\*B if right is
+ False or A\*C == d\*B if right is True.
+@@ -4465,7 +4465,7 @@ cdef class Matrix_integer_dense(Matrix_d
+ mpz_array_clear(mp_N, n*m)
+
+ def _solve_flint(self, Matrix_integer_dense B, right=True):
+- """
++ r"""
+ Let A equal self be a square matrix. Given B return an integer
+ matrix C and an integer d such that self C\*A == d\*B if right is
+ False or A\*C == d\*B if right is True.
+@@ -5008,7 +5008,7 @@ cdef class Matrix_integer_dense(Matrix_d
+ # This code below is by E. Burcin. Thanks!
+ #####################################################################################
+ def _hnf_mod(self, D):
+- """
++ r"""
+ INPUT:
+
+ - ``D`` -- a small integer that is assumed to be a
+diff -up src/sage/matrix/matrix_integer_sparse.pyx.orig src/sage/matrix/matrix_integer_sparse.pyx
+--- src/sage/matrix/matrix_integer_sparse.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_integer_sparse.pyx 2020-02-27 12:09:43.961809493 -0700
+@@ -909,7 +909,7 @@ cdef class Matrix_integer_sparse(Matrix_
+ return g
+
+ def _solve_right_nonsingular_square(self, B, algorithm=None, check_rank=False):
+- """
++ r"""
+ If self is a matrix `A`, then this function returns a
+ vector or matrix `X` such that `A X = B`. If
+ `B` is a vector then `X` is a vector and if
+diff -up src/sage/matrix/matrix_modn_dense_double.pyx.orig src/sage/matrix/matrix_modn_dense_double.pyx
+--- src/sage/matrix/matrix_modn_dense_double.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_modn_dense_double.pyx 2020-02-27 12:21:56.689974086 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense matrices over `\ZZ/n\ZZ` for `n < 2^{23}` using LinBox's ``Modular<double>``
+
+ AUTHORS:
+diff -up src/sage/matrix/matrix_modn_dense_float.pyx.orig src/sage/matrix/matrix_modn_dense_float.pyx
+--- src/sage/matrix/matrix_modn_dense_float.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_modn_dense_float.pyx 2020-02-27 12:16:51.940319470 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense matrices over `\ZZ/n\ZZ` for `n < 2^{11}` using LinBox's ``Modular<float>``
+
+ AUTHORS:
+diff -up src/sage/matrix/matrix_modn_dense_template.pxi.orig src/sage/matrix/matrix_modn_dense_template.pxi
+--- src/sage/matrix/matrix_modn_dense_template.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_modn_dense_template.pxi 2020-02-27 12:30:47.428707123 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense matrices over `\ZZ/n\ZZ` for `n` small using the LinBox library (FFLAS/FFPACK).
+
+ FFLAS/FFPACK are libraries to provide BLAS/LAPACK-style routines for
+@@ -663,7 +663,7 @@ cdef class Matrix_modn_dense_template(Ma
+ return (word_size, little_endian, s), 10
+
+ def _unpickle(self, data, int version):
+- """
++ r"""
+ TESTS:
+
+ Test for char-sized modulus::
+@@ -861,7 +861,7 @@ cdef class Matrix_modn_dense_template(Ma
+
+
+ cpdef _add_(self, right):
+- """
++ r"""
+ Add two dense matrices over `\Z/n\Z`
+
+ INPUT:
+@@ -2525,7 +2525,7 @@ cdef class Matrix_modn_dense_template(Ma
+ return Matrix_dense.determinant(self)
+
+ cdef xgcd_eliminate(self, celement * row1, celement* row2, Py_ssize_t start_col):
+- """
++ r"""
+ Reduces ``row1`` and ``row2`` by a unimodular transformation
+ using the xgcd relation between their first coefficients ``a`` and
+ ``b``.
+diff -up src/sage/matrix/matrix_modn_sparse.pyx.orig src/sage/matrix/matrix_modn_sparse.pyx
+--- src/sage/matrix/matrix_modn_sparse.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_modn_sparse.pyx 2020-02-27 12:31:50.826605802 -0700
+@@ -854,7 +854,7 @@ cdef class Matrix_modn_sparse(matrix_spa
+ raise ValueError("no algorithm '%s'"%algorithm)
+
+ def _solve_right_nonsingular_square(self, B, algorithm=None, check_rank=False):
+- """
++ r"""
+ If self is a matrix `A`, then this function returns a
+ vector or matrix `X` such that `A X = B`. If
+ `B` is a vector then `X` is a vector and if
+diff -up src/sage/matrix/matrix_polynomial_dense.pyx.orig src/sage/matrix/matrix_polynomial_dense.pyx
+--- src/sage/matrix/matrix_polynomial_dense.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_polynomial_dense.pyx 2020-02-27 09:22:35.512126137 -0700
+@@ -44,16 +44,16 @@ cdef class Matrix_polynomial_dense(Matri
+ commonly used in the literature.
+
+ - Working column-wise: each column of the matrix is a vector in the basis;
+- then, a $\\Bold{K}[x]$-submodule of $\\Bold{K}[x]^{m}$ of rank $n$ is
+- represented by an $m \\times n$ matrix, whose columns span the module
+- (via $\\Bold{K}[x]$-linear combinations). This matrix has full rank,
+- and $n \\leq m$.
++ then, a $\Bold{K}[x]$-submodule of $\Bold{K}[x]^{m}$ of rank $n$ is
++ represented by an $m \times n$ matrix, whose columns span the module
++ (via $\Bold{K}[x]$-linear combinations). This matrix has full rank,
++ and $n \leq m$.
+
+ - Working row-wise: each row of the matrix is a vector in the basis; then,
+- a $\\Bold{K}[x]$-submodule of $\\Bold{K}[x]^{n}$ of rank $m$ is
+- represented by an $m \\times n$ matrix, whose rows span the module (via
+- $\\Bold{K}[x]$-linear combinations). This matrix has full rank, and $m
+- \\leq n$.
++ a $\Bold{K}[x]$-submodule of $\Bold{K}[x]^{n}$ of rank $m$ is
++ represented by an $m \times n$ matrix, whose rows span the module (via
++ $\Bold{K}[x]$-linear combinations). This matrix has full rank, and $m
++ \leq n$.
+
+ For the rest of this class description, we assume that one is working
+ row-wise. For a given such module, all its bases are equivalent under
+diff -up src/sage/matrix/matrix_rational_dense.pyx.orig src/sage/matrix/matrix_rational_dense.pyx
+--- src/sage/matrix/matrix_rational_dense.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matrix/matrix_rational_dense.pyx 2020-02-27 12:27:53.166741857 -0700
+@@ -489,7 +489,7 @@ cdef class Matrix_rational_dense(Matrix_
+ return rich_to_bool(op, 0)
+
+ cdef _vector_times_matrix_(self, Vector v):
+- """
++ r"""
+ Returns the vector times matrix product.
+
+ INPUT:
+@@ -902,7 +902,7 @@ cdef class Matrix_rational_dense(Matrix_
+ return 0
+
+ def _clear_denom(self):
+- """
++ r"""
+ INPUT:
+
+
+@@ -958,7 +958,7 @@ cdef class Matrix_rational_dense(Matrix_
+ return X
+
+ def charpoly(self, var='x', algorithm=None):
+- """
++ r"""
+ Return the characteristic polynomial of this matrix.
+
+ .. NOTE::
+@@ -1169,7 +1169,7 @@ cdef class Matrix_rational_dense(Matrix_
+ return ans
+
+ def _multiply_over_integers(self, Matrix_rational_dense right, algorithm='default'):
+- """
++ r"""
+ Multiply this matrix by right using a multimodular algorithm and
+ return the result.
+
+diff -up src/sage/matroids/basis_exchange_matroid.pyx.orig src/sage/matroids/basis_exchange_matroid.pyx
+--- src/sage/matroids/basis_exchange_matroid.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/basis_exchange_matroid.pyx 2020-02-27 14:52:21.996354648 -0700
+@@ -2115,7 +2115,7 @@ cdef class BasisExchangeMatroid(Matroid)
+ return EQ[0]
+
+ cpdef _is_isomorphism(self, other, morphism):
+- """
++ r"""
+ Version of is_isomorphism() that does no type checking.
+
+ INPUT:
+diff -up src/sage/matroids/basis_matroid.pyx.orig src/sage/matroids/basis_matroid.pyx
+--- src/sage/matroids/basis_matroid.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/basis_matroid.pyx 2020-02-27 11:05:01.945973893 -0700
+@@ -1281,7 +1281,7 @@ cdef long set_to_index(bitset_t S):
+ return index
+
+ cdef index_to_set(bitset_t S, long index, long k, long n):
+- """
++ r"""
+ Compute the k-subset of `\{0, ..., n-1\}` of rank index
+ """
+ bitset_clear(S)
+diff -up src/sage/matroids/extension.pyx.orig src/sage/matroids/extension.pyx
+--- src/sage/matroids/extension.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/extension.pyx 2020-02-27 11:09:44.223086757 -0700
+@@ -247,7 +247,7 @@ cdef class LinearSubclassesIter:
+
+
+ cdef class LinearSubclasses:
+- """
++ r"""
+ An iterable set of linear subclasses of a matroid.
+
+ Enumerate linear subclasses of a given matroid. A *linear subclass* is a
+@@ -411,7 +411,7 @@ cdef class LinearSubclasses:
+
+
+ cdef class MatroidExtensions(LinearSubclasses):
+- """
++ r"""
+ An iterable set of single-element extensions of a given matroid.
+
+ INPUT:
+diff -up src/sage/matroids/lean_matrix.pyx.orig src/sage/matroids/lean_matrix.pyx
+--- src/sage/matroids/lean_matrix.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/lean_matrix.pyx 2020-02-27 14:51:31.676283450 -0700
+@@ -2721,7 +2721,7 @@ cdef class QuaternaryMatrix(LeanMatrix):
+ return sage.matroids.unpickling.unpickle_quaternary_matrix, (version, data)
+
+ cpdef GenericMatrix generic_identity(n, ring):
+- """
++ r"""
+ Return a GenericMatrix instance containing the `n \times n` identity
+ matrix over ``ring``.
+
+diff -up src/sage/matroids/linear_matroid.pyx.orig src/sage/matroids/linear_matroid.pyx
+--- src/sage/matroids/linear_matroid.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/linear_matroid.pyx 2020-02-27 11:08:49.724030318 -0700
+@@ -757,7 +757,7 @@ cdef class LinearMatroid(BasisExchangeMa
+ return {e: R[self._idx[e]] for e in self.groundset()}
+
+ cpdef LeanMatrix _reduced_representation(self, B=None):
+- """
++ r"""
+ Return a reduced representation of the matroid, i.e. a matrix `R` such
+ that `[I\ \ R]` represents the matroid.
+
+@@ -796,7 +796,7 @@ cdef class LinearMatroid(BasisExchangeMa
+ # (field) isomorphism
+
+ cpdef bint _is_field_isomorphism(self, LinearMatroid other, morphism): # not safe if self == other
+- """
++ r"""
+ Version of :meth:`<LinearMatroid.is_field_isomorphism>` that does no
+ type checking.
+
+@@ -962,7 +962,7 @@ cdef class LinearMatroid(BasisExchangeMa
+ return self._is_field_isomorphism(other, morphism)
+
+ cpdef is_field_isomorphism(self, other, morphism):
+- """
++ r"""
+ Test if a provided morphism induces a bijection between represented
+ matroids.
+
+@@ -1318,7 +1318,7 @@ cdef class LinearMatroid(BasisExchangeMa
+ return type(self)(reduced_matrix=M, groundset=rows + cols)
+
+ cpdef dual(self):
+- """
++ r"""
+ Return the dual of the matroid.
+
+ Let `M` be a matroid with ground set `E`. If `B` is the set of bases
+@@ -1350,7 +1350,7 @@ cdef class LinearMatroid(BasisExchangeMa
+ return type(self)(reduced_matrix=R, groundset=cols + rows)
+
+ cpdef has_line_minor(self, k, hyperlines=None, certificate=False):
+- """
++ r"""
+ Test if the matroid has a `U_{2, k}`-minor.
+
+ The matroid `U_{2, k}` is a matroid on `k` elements in which every
+@@ -3093,7 +3093,7 @@ cdef class BinaryMatroid(LinearMatroid):
+ self._one = GF2_one
+
+ cpdef base_ring(self):
+- """
++ r"""
+ Return the base ring of the matrix representing the matroid,
+ in this case `\GF{2}`.
+
+@@ -3273,7 +3273,7 @@ cdef class BinaryMatroid(LinearMatroid):
+ return self._A.copy() # Deprecated Sage matrix operation
+
+ cpdef LeanMatrix _reduced_representation(self, B=None):
+- """
++ r"""
+ Return a reduced representation of the matroid, i.e. a matrix `R` such
+ that `[I\ \ R]` represents the matroid.
+
+@@ -4161,7 +4161,7 @@ cdef class TernaryMatroid(LinearMatroid)
+ self._two = GF3_minus_one
+
+ cpdef base_ring(self):
+- """
++ r"""
+ Return the base ring of the matrix representing the matroid, in this
+ case `\GF{3}`.
+
+@@ -4345,7 +4345,7 @@ cdef class TernaryMatroid(LinearMatroid)
+ return self._A.copy() # Deprecated Sage matrix operation
+
+ cpdef LeanMatrix _reduced_representation(self, B=None):
+- """
++ r"""
+ Return a reduced representation of the matroid, i.e. a matrix `R`
+ such that `[I\ \ R]` represents the matroid.
+
+@@ -4527,7 +4527,7 @@ cdef class TernaryMatroid(LinearMatroid)
+ return self._t_invariant
+
+ cpdef bicycle_dimension(self):
+- """
++ r"""
+ Return the bicycle dimension of the ternary matroid.
+
+ The bicycle dimension of a linear subspace `V` is
+@@ -5060,7 +5060,7 @@ cdef class QuaternaryMatroid(LinearMatro
+ self._x_one = (<QuaternaryMatrix>self._A)._x_one
+
+ cpdef base_ring(self):
+- """
++ r"""
+ Return the base ring of the matrix representing the matroid, in this
+ case `\GF{4}`.
+
+@@ -5237,7 +5237,7 @@ cdef class QuaternaryMatroid(LinearMatro
+ return self._A.copy() # Deprecated Sage matrix operation
+
+ cpdef LeanMatrix _reduced_representation(self, B=None):
+- """
++ r"""
+ Return a reduced representation of the matroid, i.e. a matrix `R` such
+ that `[I\ \ R]` represents the matroid.
+
+@@ -5377,7 +5377,7 @@ cdef class QuaternaryMatroid(LinearMatro
+ return self._q_invariant
+
+ cpdef bicycle_dimension(self):
+- """
++ r"""
+ Return the bicycle dimension of the quaternary matroid.
+
+ The bicycle dimension of a linear subspace `V` is
+@@ -5774,7 +5774,7 @@ cdef class RegularMatroid(LinearMatroid)
+ return P
+
+ cpdef base_ring(self):
+- """
++ r"""
+ Return the base ring of the matrix representing the matroid, in this
+ case `\ZZ`.
+
+@@ -6192,7 +6192,7 @@ cdef class RegularMatroid(LinearMatroid)
+ return {e:idx[m[str(e)]] for e in self.groundset() if str(e) in m}
+
+ cpdef has_line_minor(self, k, hyperlines=None, certificate=False):
+- """
++ r"""
+ Test if the matroid has a `U_{2, k}`-minor.
+
+ The matroid `U_{2, k}` is a matroid on `k` elements in which every
+diff -up src/sage/matroids/matroid.pyx.orig src/sage/matroids/matroid.pyx
+--- src/sage/matroids/matroid.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/matroid.pyx 2020-02-27 11:14:07.206492095 -0700
+@@ -3080,7 +3080,7 @@ cdef class Matroid(SageObject):
+ return Polyhedron(vertices)
+
+ def independence_matroid_polytope(self):
+- """
++ r"""
+ Return the independence matroid polytope of ``self``.
+
+ This is defined as the convex hull of the vertices
+@@ -3360,7 +3360,7 @@ cdef class Matroid(SageObject):
+ return self._is_isomorphism(other, morphism)
+
+ cpdef is_isomorphism(self, other, morphism):
+- """
++ r"""
+ Test if a provided morphism induces a matroid isomorphism.
+
+ A *morphism* is a map from the groundset of ``self`` to the groundset
+@@ -3483,7 +3483,7 @@ cdef class Matroid(SageObject):
+ return self._is_isomorphism(other, mf)
+
+ cpdef _is_isomorphism(self, other, morphism):
+- """
++ r"""
+ Version of is_isomorphism() that does no type checking.
+
+ INPUT:
+@@ -3887,7 +3887,7 @@ cdef class Matroid(SageObject):
+ return self.delete(X)
+
+ cpdef dual(self):
+- """
++ r"""
+ Return the dual of the matroid.
+
+ Let `M` be a matroid with ground set `E`. If `B` is the set of bases
+@@ -3999,7 +3999,7 @@ cdef class Matroid(SageObject):
+ return self._has_minor(N, certificate)
+
+ cpdef has_line_minor(self, k, hyperlines=None, certificate=False):
+- """
++ r"""
+ Test if the matroid has a `U_{2, k}`-minor.
+
+ The matroid `U_{2, k}` is a matroid on `k` elements in which every
+@@ -4071,7 +4071,7 @@ cdef class Matroid(SageObject):
+ return self._has_line_minor(k, hyperlines, certificate)
+
+ cpdef _has_line_minor(self, k, hyperlines, certificate=False):
+- """
++ r"""
+ Test if the matroid has a `U_{2, k}`-minor.
+
+ Internal version that does no input checking.
+@@ -4259,7 +4259,7 @@ cdef class Matroid(SageObject):
+ return self.dual().extension(element, subsets).dual()
+
+ cpdef modular_cut(self, subsets):
+- """
++ r"""
+ Compute the modular cut generated by ``subsets``.
+
+ A *modular cut* is a collection `C` of flats such that
+@@ -4349,7 +4349,7 @@ cdef class Matroid(SageObject):
+ return final_list
+
+ cpdef linear_subclasses(self, line_length=None, subsets=None):
+- """
++ r"""
+ Return an iterable set of linear subclasses of the matroid.
+
+ A *linear subclass* is a set of hyperplanes (i.e. closed sets of rank
+@@ -4660,7 +4660,7 @@ cdef class Matroid(SageObject):
+ return True
+
+ cpdef is_cosimple(self):
+- """
++ r"""
+ Test if the matroid is cosimple.
+
+ A matroid is *cosimple* if it contains no cocircuits of length 1 or 2.
+@@ -4737,7 +4737,7 @@ cdef class Matroid(SageObject):
+ return components
+
+ cpdef is_connected(self, certificate=False):
+- """
++ r"""
+ Test if the matroid is connected.
+
+ A *separation* in a matroid is a partition `(X, Y)` of the
+@@ -7432,7 +7432,7 @@ cdef class Matroid(SageObject):
+ return A
+
+ cpdef tutte_polynomial(self, x=None, y=None):
+- """
++ r"""
+ Return the Tutte polynomial of the matroid.
+
+ The *Tutte polynomial* of a matroid is the polynomial
+diff -up src/sage/matroids/set_system.pyx.orig src/sage/matroids/set_system.pyx
+--- src/sage/matroids/set_system.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/matroids/set_system.pyx 2020-02-27 14:50:11.189769061 -0700
+@@ -510,7 +510,7 @@ cdef class SetSystem:
+ return P
+
+ cpdef _equitable_partition(self, SetSystem P=None, EP=None):
+- """
++ r"""
+ Return an equitable ordered partition of the ground set of the
+ hypergraph whose edges are the subsets in this SetSystem.
+
+diff -up src/sage/misc/cachefunc.pyx.orig src/sage/misc/cachefunc.pyx
+--- src/sage/misc/cachefunc.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/misc/cachefunc.pyx 2020-02-27 11:38:25.902302125 -0700
+@@ -835,7 +835,7 @@ cdef class CachedFunction(object):
+ ## forward other questions to the cached function.
+
+ def _instancedoc_(self):
+- """
++ r"""
+ Provide documentation for the cached function.
+
+ A cached function shall inherit the documentation
+diff -up src/sage/modular/arithgroup/arithgroup_element.pyx.orig src/sage/modular/arithgroup/arithgroup_element.pyx
+--- src/sage/modular/arithgroup/arithgroup_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modular/arithgroup/arithgroup_element.pyx 2020-02-27 11:52:51.677078266 -0700
+@@ -194,7 +194,7 @@ cdef class ArithmeticSubgroupElement(Mul
+ return richcmp(self.__x, right.__x, op)
+
+ def __nonzero__(self):
+- """
++ r"""
+ Return ``True``, since the ``self`` lives in SL(2,\Z), which does not
+ contain the zero matrix.
+
+diff -up src/sage/modular/arithgroup/congroup.pyx.orig src/sage/modular/arithgroup/congroup.pyx
+--- src/sage/modular/arithgroup/congroup.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modular/arithgroup/congroup.pyx 2020-02-27 09:02:34.164911827 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Cython helper functions for congruence subgroups
+
+ This file contains optimized Cython implementations of a few functions related
+diff -up src/sage/modular/arithgroup/farey_symbol.pyx.orig src/sage/modular/arithgroup/farey_symbol.pyx
+--- src/sage/modular/arithgroup/farey_symbol.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modular/arithgroup/farey_symbol.pyx 2020-02-27 09:01:09.509443852 -0700
+@@ -617,7 +617,7 @@ cdef class Farey:
+ (forced_format is None and '\\xymatrix' in latex.mathjax_avoid_list()):
+ # output not using xymatrix
+ s = r'\left( -\infty'
+- a = [x._latex_() for x in self.fractions()] + ['\infty']
++ a = [x._latex_() for x in self.fractions()] + [r'\infty']
+ b = self.pairings()
+ for i in xrange(len(a)):
+ u = b[i]
+diff -up src/sage/modular/modsym/heilbronn.pyx.orig src/sage/modular/modsym/heilbronn.pyx
+--- src/sage/modular/modsym/heilbronn.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modular/modsym/heilbronn.pyx 2020-02-27 11:56:13.562672136 -0700
+@@ -209,7 +209,7 @@ cdef class Heilbronn:
+ sig_off()
+
+ cdef apply_to_polypart(self, fmpz_poly_t* ans, int i, int k):
+- """
++ r"""
+ INPUT:
+
+ - ``ans`` - fmpz_poly_t\*; pre-allocated an
+diff -up src/sage/modular/modsym/manin_symbol.pyx.orig src/sage/modular/modsym/manin_symbol.pyx
+--- src/sage/modular/modsym/manin_symbol.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modular/modsym/manin_symbol.pyx 2020-02-27 09:03:56.595444297 -0700
+@@ -1,5 +1,5 @@
+ # -*- coding: utf-8 -*-
+-"""
++r"""
+ Manin symbols
+
+ This module defines the class ManinSymbol. A Manin symbol of
+diff -up src/sage/modular/modsym/p1list.pyx.orig src/sage/modular/modsym/p1list.pyx
+--- src/sage/modular/modsym/p1list.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modular/modsym/p1list.pyx 2020-02-27 11:55:42.521181786 -0700
+@@ -27,7 +27,7 @@ ctypedef long long llong
+ cdef int c_p1_normalize_int(int N, int u, int v,
+ int* uu, int* vv, int* ss,
+ int compute_s) except -1:
+- """
++ r"""
+ Computes the canonical representative of
+ `\mathbb{P}^1(\ZZ/N\ZZ)` equivalent to
+ `(u,v)` along with a transforming scalar.
+@@ -478,7 +478,7 @@ def p1list_llong(int N):
+ return lst
+
+ def p1list(N):
+- """
++ r"""
+ Returns the elements of the projective line modulo `N`,
+ `\mathbb{P}^1(\ZZ/N\ZZ)`, as a plain list of 2-tuples.
+
+@@ -655,7 +655,7 @@ cdef int p1_normalize_xgcdtable(int N, i
+
+
+ cdef class P1List(object):
+- """
++ r"""
+ The class for `\mathbb{P}^1(\ZZ/N\ZZ)`, the projective line modulo `N`.
+
+ EXAMPLES::
+@@ -673,7 +673,7 @@ cdef class P1List(object):
+ True
+ """
+ def __init__(self, int N):
+- """
++ r"""
+ The constructor for the class P1List.
+
+ INPUT:
+@@ -824,7 +824,7 @@ cdef class P1List(object):
+ return "The projective line over the integers modulo %s"%self.__N
+
+ def lift_to_sl2z(self, int i):
+- """
++ r"""
+ Lift the `i`'th element of this P1list to an element of
+ `SL(2,\ZZ)`.
+
+@@ -1187,7 +1187,7 @@ cdef class export:
+ return c_p1_normalize_llong(N, u, v, uu, vv, ss, compute_s)
+
+ def lift_to_sl2z_int(int c, int d, int N):
+- """
++ r"""
+ Lift a pair `(c, d)` to an element of `SL(2, \ZZ)`.
+
+ `(c,d)` is assumed to be an element of
+diff -up src/sage/modules/free_module_element.pyx.orig src/sage/modules/free_module_element.pyx
+--- src/sage/modules/free_module_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/modules/free_module_element.pyx 2020-02-27 15:01:58.389454347 -0700
+@@ -1966,7 +1966,7 @@ cdef class FreeModuleElement(Vector):
+ return copy(self)
+
+ def lift_centered(self):
+- """
++ r"""
+ Lift to a congruent, centered vector.
+
+ INPUT:
+@@ -2338,7 +2338,7 @@ cdef class FreeModuleElement(Vector):
+
+ def plot_step(self, xmin=0, xmax=1, eps=None, res=None,
+ connect=True, **kwds):
+- """
++ r"""
+ INPUT:
+
+ - ``xmin`` - (default: 0) start x position to start
+@@ -3609,7 +3609,7 @@ cdef class FreeModuleElement(Vector):
+ from sage.misc.latex import latex
+ vector_delimiters = latex.vector_delimiters()
+ s = '\\left' + vector_delimiters[0]
+- s += ',\,'.join([latex(a) for a in self.list()])
++ s += ',\\,'.join([latex(a) for a in self.list()])
+ return s + '\\right' + vector_delimiters[1]
+
+ def dense_vector(self):
+diff -up src/sage/numerical/backends/generic_backend.pyx.orig src/sage/numerical/backends/generic_backend.pyx
+--- src/sage/numerical/backends/generic_backend.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/numerical/backends/generic_backend.pyx 2020-02-27 15:12:48.869255994 -0700
+@@ -1370,7 +1370,7 @@ cdef class GenericBackend:
+ raise NotImplementedError()
+
+ cpdef bint is_variable_basic(self, int index):
+- """
++ r"""
+ Test whether the given variable is basic.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1400,7 +1400,7 @@ cdef class GenericBackend:
+ raise NotImplementedError()
+
+ cpdef bint is_variable_nonbasic_at_lower_bound(self, int index):
+- """
++ r"""
+ Test whether the given variable is nonbasic at lower bound.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1430,7 +1430,7 @@ cdef class GenericBackend:
+ raise NotImplementedError()
+
+ cpdef bint is_slack_variable_basic(self, int index):
+- """
++ r"""
+ Test whether the slack variable of the given row is basic.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1460,7 +1460,7 @@ cdef class GenericBackend:
+ raise NotImplementedError()
+
+ cpdef bint is_slack_variable_nonbasic_at_lower_bound(self, int index):
+- """
++ r"""
+ Test whether the given variable is nonbasic at lower bound.
+
+ This assumes that the problem has been solved with the simplex method
+diff -up src/sage/numerical/backends/glpk_backend.pyx.orig src/sage/numerical/backends/glpk_backend.pyx
+--- src/sage/numerical/backends/glpk_backend.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/numerical/backends/glpk_backend.pyx 2020-02-27 15:11:17.902928905 -0700
+@@ -2130,7 +2130,7 @@ cdef class GLPKBackend(GenericBackend):
+
+
+ cpdef bint is_variable_basic(self, int index):
+- """
++ r"""
+ Test whether the given variable is basic.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -2161,7 +2161,7 @@ cdef class GLPKBackend(GenericBackend):
+ return self.get_col_stat(index) == GLP_BS
+
+ cpdef bint is_variable_nonbasic_at_lower_bound(self, int index):
+- """
++ r"""
+ Test whether the given variable is nonbasic at lower bound.
+ This assumes that the problem has been solved with the simplex method
+ and a basis is available. Otherwise an exception will be raised.
+@@ -2191,7 +2191,7 @@ cdef class GLPKBackend(GenericBackend):
+ return self.get_col_stat(index) == GLP_NL
+
+ cpdef bint is_slack_variable_basic(self, int index):
+- """
++ r"""
+ Test whether the slack variable of the given row is basic.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -2222,7 +2222,7 @@ cdef class GLPKBackend(GenericBackend):
+ return self.get_row_stat(index) == GLP_BS
+
+ cpdef bint is_slack_variable_nonbasic_at_lower_bound(self, int index):
+- """
++ r"""
+ Test whether the slack variable of the given row is nonbasic at lower bound.
+
+ This assumes that the problem has been solved with the simplex method
+diff -up src/sage/numerical/backends/interactivelp_backend.pyx.orig src/sage/numerical/backends/interactivelp_backend.pyx
+--- src/sage/numerical/backends/interactivelp_backend.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/numerical/backends/interactivelp_backend.pyx 2020-02-27 15:09:45.383668708 -0700
+@@ -1071,7 +1071,7 @@ cdef class InteractiveLPBackend:
+ problem_type, ring, objective_constant_term=d)
+
+ cpdef bint is_variable_basic(self, int index):
+- """
++ r"""
+ Test whether the given variable is basic.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1101,7 +1101,7 @@ cdef class InteractiveLPBackend:
+ return self.lp_std_form.decision_variables()[index] in self.final_dictionary.basic_variables()
+
+ cpdef bint is_variable_nonbasic_at_lower_bound(self, int index):
+- """
++ r"""
+ Test whether the given variable is nonbasic at lower bound.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1131,7 +1131,7 @@ cdef class InteractiveLPBackend:
+ return self.lp_std_form.decision_variables()[index] in self.final_dictionary.nonbasic_variables()
+
+ cpdef bint is_slack_variable_basic(self, int index):
+- """
++ r"""
+ Test whether the slack variable of the given row is basic.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1161,7 +1161,7 @@ cdef class InteractiveLPBackend:
+ return self.lp_std_form.slack_variables()[index] in self.final_dictionary.basic_variables()
+
+ cpdef bint is_slack_variable_nonbasic_at_lower_bound(self, int index):
+- """
++ r"""
+ Test whether the given variable is nonbasic at lower bound.
+
+ This assumes that the problem has been solved with the simplex method
+@@ -1193,7 +1193,7 @@ cdef class InteractiveLPBackend:
+ cpdef dictionary(self):
+ # Proposed addition to the general interface,
+ # which would for other solvers return backend dictionaries (#18804)
+- """
++ r"""
+ Return a dictionary representing the current basis.
+
+ EXAMPLES::
+@@ -1228,7 +1228,7 @@ cdef class InteractiveLPBackend:
+
+ cpdef interactive_lp_problem(self):
+
+- """
++ r"""
+ Return the :class:`InteractiveLPProblem` object associated with this backend.
+
+ EXAMPLES::
+diff -up src/sage/quadratic_forms/count_local_2.pyx.orig src/sage/quadratic_forms/count_local_2.pyx
+--- src/sage/quadratic_forms/count_local_2.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/quadratic_forms/count_local_2.pyx 2020-02-27 14:47:35.887635615 -0700
+@@ -168,7 +168,7 @@ cdef CountAllLocalTypesNaive_cdef(Q, p,
+
+
+ def CountAllLocalTypesNaive(Q, p, k, m, zvec, nzvec):
+- """
++ r"""
+ This is an internal routine, which is called by
+ :meth:`sage.quadratic_forms.quadratic_form.QuadraticForm.count_congruence_solutions_by_type
+ QuadraticForm.count_congruence_solutions_by_type`. See the documentation of
+diff -up src/sage/quivers/algebra_elements.pyx.orig src/sage/quivers/algebra_elements.pyx
+--- src/sage/quivers/algebra_elements.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/quivers/algebra_elements.pyx 2020-02-27 11:46:21.879821027 -0700
+@@ -280,7 +280,7 @@ cdef class PathAlgebraElement(RingElemen
+ )
+
+ def _latex_(self):
+- """
++ r"""
+ Latex string representation.
+
+ EXAMPLES::
+diff -up src/sage/rings/bernoulli_mod_p.pyx.orig src/sage/rings/bernoulli_mod_p.pyx
+--- src/sage/rings/bernoulli_mod_p.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/bernoulli_mod_p.pyx 2020-02-27 14:12:09.407391213 -0700
+@@ -35,7 +35,7 @@ from sage.rings.bernmm import bernmm_ber
+
+
+ def verify_bernoulli_mod_p(data):
+- """
++ r"""
+ Computes checksum for Bernoulli numbers.
+
+ It checks the identity
+diff -up src/sage/rings/complex_arb.pyx.orig src/sage/rings/complex_arb.pyx
+--- src/sage/rings/complex_arb.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/complex_arb.pyx 2020-02-27 10:34:45.320041770 -0700
+@@ -2922,7 +2922,7 @@ cdef class ComplexBall(RingElement):
+ return res
+
+ def rising_factorial(self, n):
+- """
++ r"""
+ Return the ``n``-th rising factorial of this ball.
+
+ The `n`-th rising factorial of `x` is equal to `x (x+1) \cdots (x+n-1)`.
+@@ -3640,7 +3640,7 @@ cdef class ComplexBall(RingElement):
+ return res
+
+ def polylog(self, s):
+- """
++ r"""
+ Return the polylogarithm `\operatorname{Li}_s(\mathrm{self})`.
+
+ EXAMPLES::
+diff -up src/sage/rings/complex_double.pyx.orig src/sage/rings/complex_double.pyx
+--- src/sage/rings/complex_double.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/complex_double.pyx 2020-02-27 10:32:06.489839183 -0700
+@@ -1578,7 +1578,7 @@ cdef class ComplexDoubleElement(FieldEle
+ return self.real().is_NaN() or self.imag().is_NaN()
+
+ cpdef _pow_(self, other):
+- """
++ r"""
+ The complex number ``self`` raised to the power ``other``.
+
+ This is computed using complex logarithms and exponentials
+diff -up src/sage/rings/complex_interval.pyx.orig src/sage/rings/complex_interval.pyx
+--- src/sage/rings/complex_interval.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/complex_interval.pyx 2020-02-27 10:20:29.626115066 -0700
+@@ -714,7 +714,7 @@ cdef class ComplexIntervalFieldElement(s
+ return x
+
+ def norm(self):
+- """
++ r"""
+ Return the norm of this complex number.
+
+ If `c = a + bi` is a complex number, then the norm of `c` is defined as
+@@ -1096,7 +1096,7 @@ cdef class ComplexIntervalFieldElement(s
+ return x
+
+ def __invert__(self):
+- """
++ r"""
+ Return the multiplicative inverse of ``self``.
+
+ EXAMPLES::
+diff -up src/sage/rings/complex_mpc.pyx.orig src/sage/rings/complex_mpc.pyx
+--- src/sage/rings/complex_mpc.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/complex_mpc.pyx 2020-02-26 11:15:34.722679686 -0700
+@@ -147,15 +147,15 @@ cdef inline mpfr_rnd_t rnd_im(mpc_rnd_t
+ sign = '[+-]'
+ digit_ten = '[0123456789]'
+ exponent_ten = '[e@]' + sign + '?[0123456789]+'
+-number_ten = 'inf(?:inity)?|@inf@|nan(?:\([0-9A-Z_]*\))?|@nan@(?:\([0-9A-Z_]*\))?'\
+- '|(?:' + digit_ten + '*\.' + digit_ten + '+|' + digit_ten + '+\.?)(?:' + exponent_ten + ')?'
+-imaginary_ten = 'i(?:\s*\*\s*(?:' + number_ten + '))?|(?:' + number_ten + ')\s*\*\s*i'
+-complex_ten = '(?P<im_first>(?P<im_first_im_sign>' + sign + ')?\s*(?P<im_first_im_abs>' + imaginary_ten + ')' \
+- '(\s*(?P<im_first_re_sign>' + sign + ')\s*(?P<im_first_re_abs>' + number_ten + '))?)' \
++number_ten = r'inf(?:inity)?|@inf@|nan(?:\([0-9A-Z_]*\))?|@nan@(?:\([0-9A-Z_]*\))?'\
++ '|(?:' + digit_ten + r'*\.' + digit_ten + '+|' + digit_ten + r'+\.?)(?:' + exponent_ten + ')?'
++imaginary_ten = r'i(?:\s*\*\s*(?:' + number_ten + '))?|(?:' + number_ten + r')\s*\*\s*i'
++complex_ten = '(?P<im_first>(?P<im_first_im_sign>' + sign + r')?\s*(?P<im_first_im_abs>' + imaginary_ten + ')' \
++ r'(\s*(?P<im_first_re_sign>' + sign + r')\s*(?P<im_first_re_abs>' + number_ten + '))?)' \
+ '|' \
+- '(?P<re_first>(?P<re_first_re_sign>' + sign + ')?\s*(?P<re_first_re_abs>' + number_ten + ')' \
+- '(\s*(?P<re_first_im_sign>' + sign + ')\s*(?P<re_first_im_abs>' + imaginary_ten + '))?)'
+-re_complex_ten = re.compile('^\s*(?:' + complex_ten + ')\s*$', re.I)
++ '(?P<re_first>(?P<re_first_re_sign>' + sign + r')?\s*(?P<re_first_re_abs>' + number_ten + ')' \
++ r'(\s*(?P<re_first_im_sign>' + sign + r')\s*(?P<re_first_im_abs>' + imaginary_ten + '))?)'
++re_complex_ten = re.compile(r'^\s*(?:' + complex_ten + r')\s*$', re.I)
+
+ cpdef inline split_complex_string(string, int base=10):
+ """
+@@ -195,17 +195,17 @@ cpdef inline split_complex_string(string
+
+ # Warning: number, imaginary, and complex should be enclosed in parentheses
+ # when used as regexp because of alternatives '|'
+- number = '@nan@(?:\([0-9A-Z_]*\))?|@inf@|(?:' + digit + '*\.' + digit + '+|' + digit + '+\.?)(?:' + exponent + ')?'
++ number = r'@nan@(?:\([0-9A-Z_]*\))?|@inf@|(?:' + digit + r'*\.' + digit + '+|' + digit + r'+\.?)(?:' + exponent + ')?'
+ if base <= 10:
+- number = 'nan(?:\([0-9A-Z_]*\))?|inf(?:inity)?|' + number
+- imaginary = 'i(?:\s*\*\s*(?:' + number + '))?|(?:' + number + ')\s*\*\s*i'
+- complex = '(?P<im_first>(?P<im_first_im_sign>' + sign + ')?\s*(?P<im_first_im_abs>' + imaginary + ')' \
+- '(\s*(?P<im_first_re_sign>' + sign + ')\s*(?P<im_first_re_abs>' + number + '))?)' \
++ number = r'nan(?:\([0-9A-Z_]*\))?|inf(?:inity)?|' + number
++ imaginary = r'i(?:\s*\*\s*(?:' + number + '))?|(?:' + number + r')\s*\*\s*i'
++ complex = '(?P<im_first>(?P<im_first_im_sign>' + sign + r')?\s*(?P<im_first_im_abs>' + imaginary + ')' \
++ r'(\s*(?P<im_first_re_sign>' + sign + r')\s*(?P<im_first_re_abs>' + number + '))?)' \
+ '|' \
+- '(?P<re_first>(?P<re_first_re_sign>' + sign + ')?\s*(?P<re_first_re_abs>' + number + ')' \
+- '(\s*(?P<re_first_im_sign>' + sign + ')\s*(?P<re_first_im_abs>' + imaginary + '))?)'
++ '(?P<re_first>(?P<re_first_re_sign>' + sign + r')?\s*(?P<re_first_re_abs>' + number + ')' \
++ r'(\s*(?P<re_first_im_sign>' + sign + r')\s*(?P<re_first_im_abs>' + imaginary + '))?)'
+
+- z = re.match('^\s*(?:' + complex + ')\s*$', string, re.I)
++ z = re.match(r'^\s*(?:' + complex + r')\s*$', string, re.I)
+
+ x, y = None, None
+ if z is not None:
+@@ -217,18 +217,18 @@ cpdef inline split_complex_string(string
+ return None
+
+ if z.group(prefix + '_re_abs') is not None:
+- x = z.expand('\g<' + prefix + '_re_abs>')
++ x = z.expand(r'\g<' + prefix + '_re_abs>')
+ if z.group(prefix + '_re_sign') is not None:
+- x = z.expand('\g<' + prefix + '_re_sign>') + x
++ x = z.expand(r'\g<' + prefix + '_re_sign>') + x
+
+ if z.group(prefix + '_im_abs') is not None:
+- y = re.search('(?P<im_part>' + number + ')', z.expand('\g<' + prefix + '_im_abs>'), re.I)
++ y = re.search('(?P<im_part>' + number + ')', z.expand(r'\g<' + prefix + '_im_abs>'), re.I)
+ if y is None:
+ y = '1'
+ else:
+- y = y.expand('\g<im_part>')
++ y = y.expand(r'\g<im_part>')
+ if z.group(prefix + '_im_sign') is not None:
+- y = z.expand('\g<' + prefix + '_im_sign>') + y
++ y = z.expand(r'\g<' + prefix + '_im_sign>') + y
+
+ return x, y
+
+@@ -1725,7 +1725,7 @@ cdef class MPComplexNumber(sage.structur
+ return z
+
+ def cosh(self):
+- """
++ r"""
+ Return the hyperbolic cosine of this complex number:
+
+ .. MATH::
+@@ -1745,7 +1745,7 @@ cdef class MPComplexNumber(sage.structur
+ return z
+
+ def sinh(self):
+- """
++ r"""
+ Return the hyperbolic sine of this complex number:
+
+ .. MATH::
+@@ -2085,7 +2085,7 @@ cdef class MPComplexNumber(sage.structur
+ return z
+
+ def exp(self):
+- """
++ r"""
+ Return the exponential of this complex number:
+
+ .. MATH::
+diff -up src/sage/rings/complex_number.pyx.orig src/sage/rings/complex_number.pyx
+--- src/sage/rings/complex_number.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/complex_number.pyx 2020-02-27 14:09:39.595076646 -0700
+@@ -1714,7 +1714,7 @@ cdef class ComplexNumber(sage.structure.
+
+ # Other special functions
+ def agm(self, right, algorithm="optimal"):
+- """
++ r"""
+ Return the Arithmetic-Geometric Mean (AGM) of ``self`` and ``right``.
+
+ INPUT:
+diff -up src/sage/rings/finite_rings/element_givaro.pyx.orig src/sage/rings/finite_rings/element_givaro.pyx
+--- src/sage/rings/finite_rings/element_givaro.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/finite_rings/element_givaro.pyx 2020-02-27 10:22:04.184449193 -0700
+@@ -1204,7 +1204,7 @@ cdef class FiniteField_givaroElement(Fin
+ return make_FiniteField_givaroElement(self._cache,r)
+
+ def __pow__(FiniteField_givaroElement self, exp, other):
+- """
++ r"""
+ EXAMPLES::
+
+ sage: K.<a> = GF(3^3, 'a')
+@@ -1345,7 +1345,7 @@ cdef class FiniteField_givaroElement(Fin
+ return self_int
+
+ def integer_representation(FiniteField_givaroElement self):
+- """
++ r"""
+ Return the integer representation of ``self``. When ``self`` is in the
+ prime subfield, the integer returned is equal to ``self``.
+
+diff -up src/sage/rings/finite_rings/element_ntl_gf2e.pyx.orig src/sage/rings/finite_rings/element_ntl_gf2e.pyx
+--- src/sage/rings/finite_rings/element_ntl_gf2e.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/finite_rings/element_ntl_gf2e.pyx 2020-02-27 10:22:49.535650221 -0700
+@@ -400,7 +400,7 @@ cdef class Cache_ntl_gf2e(SageObject):
+ raise ValueError("Cannot coerce element %s to this field." % e)
+
+ cpdef FiniteField_ntl_gf2eElement fetch_int(self, number):
+- """
++ r"""
+ Given an integer less than `p^n` with base `2`
+ representation `a_0 + a_1 \cdot 2 + \cdots + a_k 2^k`, this returns
+ `a_0 + a_1 x + \cdots + a_k x^k`, where `x` is the
+diff -up src/sage/rings/finite_rings/finite_field_base.pyx.orig src/sage/rings/finite_rings/finite_field_base.pyx
+--- src/sage/rings/finite_rings/finite_field_base.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/finite_rings/finite_field_base.pyx 2020-02-27 10:24:14.382155455 -0700
+@@ -959,7 +959,7 @@ cdef class FiniteField(Field):
+ return self._modulus
+
+ def polynomial(self, name=None):
+- """
++ r"""
+ Return the minimal polynomial of the generator of ``self`` over
+ the prime finite field.
+
+diff -up src/sage/rings/finite_rings/hom_finite_field.pyx.orig src/sage/rings/finite_rings/hom_finite_field.pyx
+--- src/sage/rings/finite_rings/hom_finite_field.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/finite_rings/hom_finite_field.pyx 2020-02-27 14:05:34.420471507 -0700
+@@ -147,7 +147,7 @@ cdef class SectionFiniteFieldHomomorphis
+
+
+ def _repr_(self):
+- """
++ r"""
+ Return a string representation of this section.
+
+ EXAMPLES::
+diff -up src/sage/rings/finite_rings/integer_mod.pyx.orig src/sage/rings/finite_rings/integer_mod.pyx
+--- src/sage/rings/finite_rings/integer_mod.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/finite_rings/integer_mod.pyx 2020-02-27 10:27:31.196688078 -0700
+@@ -115,7 +115,7 @@ from sage.structure.parent cimport Paren
+ cdef Integer one_Z = Integer(1)
+
+ def Mod(n, m, parent=None):
+- """
++ r"""
+ Return the equivalence class of `n` modulo `m` as
+ an element of `\ZZ/m\ZZ`.
+
+@@ -1547,7 +1547,7 @@ cdef class IntegerMod_abstract(FiniteRin
+ return [a for a in self.parent() if a**n == self]
+
+ def _balanced_abs(self):
+- """
++ r"""
+ This function returns `x` or `-x`, whichever has a
+ positive representative in `-n/2 < x \leq n/2`.
+
+@@ -1896,7 +1896,7 @@ cdef class IntegerMod_abstract(FiniteRin
+
+
+ cdef class IntegerMod_gmp(IntegerMod_abstract):
+- """
++ r"""
+ Elements of `\ZZ/n\ZZ` for n not small enough
+ to be operated on in word size.
+
+@@ -2185,7 +2185,7 @@ cdef class IntegerMod_gmp(IntegerMod_abs
+ return long(self.lift())
+
+ def __pow__(IntegerMod_gmp self, exp, m): # NOTE: m ignored, always use modulus of parent ring
+- """
++ r"""
+ EXAMPLES::
+
+ sage: R = Integers(10^10)
+@@ -2294,7 +2294,7 @@ cdef class IntegerMod_gmp(IntegerMod_abs
+
+ @coerce_binop
+ def gcd(self, IntegerMod_gmp other):
+- """
++ r"""
+ Greatest common divisor
+
+ Returns the "smallest" generator in `\ZZ / N\ZZ` of the ideal
+@@ -2327,7 +2327,7 @@ cdef class IntegerMod_gmp(IntegerMod_abs
+
+
+ cdef class IntegerMod_int(IntegerMod_abstract):
+- """
++ r"""
+ Elements of `\ZZ/n\ZZ` for n small enough to
+ be operated on in 32 bits
+
+@@ -2948,7 +2948,7 @@ cdef class IntegerMod_int(IntegerMod_abs
+
+
+ def _balanced_abs(self):
+- """
++ r"""
+ This function returns `x` or `-x`, whichever has a
+ positive representative in `-n/2 < x \leq n/2`.
+ """
+@@ -2959,7 +2959,7 @@ cdef class IntegerMod_int(IntegerMod_abs
+
+ @coerce_binop
+ def gcd(self, IntegerMod_int other):
+- """
++ r"""
+ Greatest common divisor
+
+ Returns the "smallest" generator in `\ZZ / N\ZZ` of the ideal
+@@ -3137,7 +3137,7 @@ cdef int jacobi_int(int_fast32_t a, int_
+ ######################################################################
+
+ cdef class IntegerMod_int64(IntegerMod_abstract):
+- """
++ r"""
+ Elements of `\ZZ/n\ZZ` for n small enough to
+ be operated on in 64 bits
+
+@@ -3448,7 +3448,7 @@ cdef class IntegerMod_int64(IntegerMod_a
+ return self._new_c(self.ivalue >> (-k))
+
+ def __pow__(IntegerMod_int64 self, exp, m): # NOTE: m ignored, always use modulus of parent ring
+- """
++ r"""
+ EXAMPLES::
+
+ sage: R = Integers(10)
+@@ -3596,7 +3596,7 @@ cdef class IntegerMod_int64(IntegerMod_a
+ return hash(self.ivalue)
+
+ def _balanced_abs(self):
+- """
++ r"""
+ This function returns `x` or `-x`, whichever has a
+ positive representative in `-n/2 < x \leq n/2`.
+ """
+@@ -3607,7 +3607,7 @@ cdef class IntegerMod_int64(IntegerMod_a
+
+ @coerce_binop
+ def gcd(self, IntegerMod_int64 other):
+- """
++ r"""
+ Greatest common divisor
+
+ Returns the "smallest" generator in `\ZZ / N\ZZ` of the ideal
+diff -up src/sage/rings/finite_rings/residue_field.pyx.orig src/sage/rings/finite_rings/residue_field.pyx
+--- src/sage/rings/finite_rings/residue_field.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/finite_rings/residue_field.pyx 2020-02-26 12:24:03.640048006 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Finite residue fields
+
+ We can take the residue field of maximal ideals in the ring of integers
+@@ -1808,7 +1808,7 @@ class ResidueFiniteField_ntl_gf2e(Residu
+ """
+ # we change the order for consistency with FiniteField_ntl_gf2e's __cinit__
+ def __init__(self, q, name, modulus, repr, p, to_vs, to_order, PB):
+- """
++ r"""
+ INPUT:
+
+ - ``p`` -- the prime ideal defining this residue field
+diff -up src/sage/rings/function_field/element.pyx.orig src/sage/rings/function_field/element.pyx
+--- src/sage/rings/function_field/element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/function_field/element.pyx 2020-02-26 14:11:12.803894369 -0700
+@@ -148,7 +148,7 @@ cdef class FunctionFieldElement(FieldEle
+ raise NotImplementedError("PARI does not support general function field elements.")
+
+ def _latex_(self):
+- """
++ r"""
+ EXAMPLES::
+
+ sage: K.<t> = FunctionField(QQ)
+diff -up src/sage/rings/function_field/ideal.py.orig src/sage/rings/function_field/ideal.py
+--- src/sage/rings/function_field/ideal.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/function_field/ideal.py 2020-02-26 14:10:24.140803564 -0700
+@@ -2166,7 +2166,7 @@ class FunctionFieldIdeal_global(Function
+ return self.gens_over_base()
+
+ def gens_two(self):
+- """
++ r"""
+ Return two generators of this fractional ideal.
+
+ If the ideal is principal, one generator *may* be returned.
+diff -up src/sage/rings/integer_ring.pyx.orig src/sage/rings/integer_ring.pyx
+--- src/sage/rings/integer_ring.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/integer_ring.pyx 2020-02-27 14:00:39.430781027 -0700
+@@ -391,7 +391,7 @@ cdef class IntegerRing_class(PrincipalId
+ return "\\Bold{Z}"
+
+ def __getitem__(self, x):
+- """
++ r"""
+ Return the ring `\ZZ[...]` obtained by adjoining to the integers one
+ or several elements.
+
+@@ -1143,7 +1143,7 @@ cdef class IntegerRing_class(PrincipalId
+ return sage.rings.infinity.infinity
+
+ def zeta(self, n=2):
+- """
++ r"""
+ Return a primitive ``n``-th root of unity in the integers, or raise an
+ error if none exists.
+
+diff -up src/sage/rings/laurent_series_ring_element.pyx.orig src/sage/rings/laurent_series_ring_element.pyx
+--- src/sage/rings/laurent_series_ring_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/laurent_series_ring_element.pyx 2020-02-27 10:37:46.261850642 -0700
+@@ -86,7 +86,7 @@ def is_LaurentSeries(x):
+
+
+ cdef class LaurentSeries(AlgebraElement):
+- """
++ r"""
+ A Laurent Series.
+
+ We consider a Laurent series of the form `t^n \cdot f` where `f` is a
+diff -up src/sage/rings/number_field/number_field_element.pyx.orig src/sage/rings/number_field/number_field_element.pyx
+--- src/sage/rings/number_field/number_field_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/number_field/number_field_element.pyx 2020-02-27 14:17:24.733733303 -0700
+@@ -484,7 +484,7 @@ cdef class NumberFieldElement(FieldEleme
+ return codomain(f(im_gens[0]))
+
+ def _latex_(self):
+- """
++ r"""
+ Returns the latex representation for this element.
+
+ EXAMPLES::
+@@ -3877,7 +3877,7 @@ cdef class NumberFieldElement(FieldEleme
+ return ht
+
+ def global_height_non_arch(self, prec=None):
+- """
++ r"""
+ Returns the total non-archimedean component of the height of self.
+
+ INPUT:
+diff -up src/sage/rings/number_field/number_field_element_quadratic.pyx.orig src/sage/rings/number_field/number_field_element_quadratic.pyx
+--- src/sage/rings/number_field/number_field_element_quadratic.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/number_field/number_field_element_quadratic.pyx 2020-02-26 12:30:16.381058496 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Optimized Quadratic Number Field Elements
+
+ This file defines a Cython class ``NumberFieldElement_quadratic`` to speed up
+@@ -840,7 +840,7 @@ cdef class NumberFieldElement_quadratic(
+ return res
+
+ def parts(self):
+- """
++ r"""
+ This function returns a pair of rationals `a` and `b` such that self `=
+ a+b\sqrt{D}`.
+
+@@ -1581,7 +1581,7 @@ cdef class NumberFieldElement_quadratic(
+ #################################################################################
+
+ def __hash__(self):
+- """
++ r"""
+ Return hash of this number field element.
+
+ For elements in `\ZZ` or `\QQ` the hash coincides with the one in the
+@@ -2015,7 +2015,7 @@ cdef class NumberFieldElement_quadratic(
+
+
+ def norm(self, K=None):
+- """
++ r"""
+ Return the norm of self. If the second argument is None, this is the
+ norm down to `\QQ`. Otherwise, return the norm down to K (which had
+ better be either `\QQ` or this number field).
+diff -up src/sage/rings/number_field/number_field_morphisms.pyx.orig src/sage/rings/number_field/number_field_morphisms.pyx
+--- src/sage/rings/number_field/number_field_morphisms.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/number_field/number_field_morphisms.pyx 2020-02-27 14:15:30.637780730 -0700
+@@ -340,7 +340,7 @@ cdef class EmbeddedNumberFieldConversion
+
+
+ cpdef matching_root(poly, target, ambient_field=None, margin=1, max_prec=None):
+- """
++ r"""
+ Given a polynomial and a target, this function chooses the root that
+ target best approximates as compared in ambient_field.
+
+@@ -403,7 +403,7 @@ cpdef matching_root(poly, target, ambien
+
+
+ cpdef closest(target, values, margin=1):
+- """
++ r"""
+ This is a utility function that returns the item in values closest to
+ target (with respect to the \code{abs} function). If margin is greater
+ than 1, and x and y are the first and second closest elements to target,
+diff -up src/sage/rings/number_field/totallyreal.pyx.orig src/sage/rings/number_field/totallyreal.pyx
+--- src/sage/rings/number_field/totallyreal.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/number_field/totallyreal.pyx 2020-02-26 12:31:22.883761593 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Enumeration of Primitive Totally Real Fields
+
+ This module contains functions for enumerating all primitive
+diff -up src/sage/rings/padics/CA_template.pxi.orig src/sage/rings/padics/CA_template.pxi
+--- src/sage/rings/padics/CA_template.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/CA_template.pxi 2020-02-27 14:21:45.536053250 -0700
+@@ -392,7 +392,7 @@ cdef class CAElement(pAdicTemplateElemen
+
+
+ def __pow__(CAElement self, _right, dummy):
+- """
++ r"""
+ Exponentiation.
+
+ When ``right`` is divisible by `p` then one can get more
+@@ -521,7 +521,7 @@ cdef class CAElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _lshift_c(self, long shift):
+- """
++ r"""
+ Multiplies by `\pi^{\mbox{shift}}`.
+
+ Negative shifts may truncate the result.
+@@ -553,7 +553,7 @@ cdef class CAElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _rshift_c(self, long shift):
+- """
++ r"""
+ Divides by ``^{\mbox{shift}}``.
+
+ Positive shifts may truncate the result.
+@@ -1611,7 +1611,7 @@ cdef class pAdicCoercion_CA_frac_field(R
+
+
+ cdef class pAdicConvert_CA_frac_field(Morphism):
+- """
++ r"""
+ The section of the inclusion from `\ZZ_q`` to its fraction field.
+
+ EXAMPLES::
+diff -up src/sage/rings/padics/CR_template.pxi.orig src/sage/rings/padics/CR_template.pxi
+--- src/sage/rings/padics/CR_template.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/CR_template.pxi 2020-02-27 14:20:48.003085660 -0700
+@@ -720,7 +720,7 @@ cdef class CRElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _lshift_c(self, long shift):
+- """
++ r"""
+ Multiplies by `\pi^{\mbox{shift}}`.
+
+ Negative shifts may truncate the result if the parent is not a
+@@ -751,7 +751,7 @@ cdef class CRElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _rshift_c(self, long shift):
+- """
++ r"""
+ Divides by ``\pi^{\mbox{shift}}``.
+
+ Positive shifts may truncate the result if the parent is not a
+@@ -2338,7 +2338,7 @@ cdef class pAdicCoercion_CR_frac_field(R
+
+
+ cdef class pAdicConvert_CR_frac_field(Morphism):
+- """
++ r"""
+ The section of the inclusion from `\ZZ_q`` to its fraction field.
+
+ EXAMPLES::
+diff -up src/sage/rings/padics/FM_template.pxi.orig src/sage/rings/padics/FM_template.pxi
+--- src/sage/rings/padics/FM_template.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/FM_template.pxi 2020-02-27 14:30:07.794033635 -0700
+@@ -381,7 +381,7 @@ cdef class FMElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _lshift_c(self, long shift):
+- """
++ r"""
+ Multiplies self by `\pi^{shift}`.
+
+ If shift < -self.valuation(), digits will be truncated. See
+@@ -428,7 +428,7 @@ cdef class FMElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _rshift_c(self, long shift):
+- """
++ r"""
+ Divides by `\pi^{shift}`, and truncates.
+
+ Note that this operation will insert arbitrary digits (in
+@@ -462,7 +462,7 @@ cdef class FMElement(pAdicTemplateElemen
+ return ans
+
+ def add_bigoh(self, absprec):
+- """
++ r"""
+ Returns a new element truncated modulo `\pi^{\mbox{absprec}}`.
+
+ INPUT:
+diff -up src/sage/rings/padics/FP_template.pxi.orig src/sage/rings/padics/FP_template.pxi
+--- src/sage/rings/padics/FP_template.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/FP_template.pxi 2020-02-27 14:27:17.166102208 -0700
+@@ -653,7 +653,7 @@ cdef class FPElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _lshift_c(self, long shift):
+- """
++ r"""
+ Multiplies self by `\pi^{shift}`.
+
+ Negative shifts may truncate the result if the parent is not a
+@@ -706,7 +706,7 @@ cdef class FPElement(pAdicTemplateElemen
+ return ans
+
+ cdef pAdicTemplateElement _rshift_c(self, long shift):
+- """
++ r"""
+ Divides by `\pi^{shift}`.
+
+ Positive shifts may truncate the result if the parent is not a
+@@ -782,7 +782,7 @@ cdef class FPElement(pAdicTemplateElemen
+ return self.parent()._printer.repr_gen(self, do_latex, mode=mode)
+
+ def add_bigoh(self, absprec):
+- """
++ r"""
+ Returns a new element truncated modulo `\pi^{\mbox{absprec}}`.
+
+ INPUT:
+diff -up src/sage/rings/padics/local_generic_element.pyx.orig src/sage/rings/padics/local_generic_element.pyx
+--- src/sage/rings/padics/local_generic_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/local_generic_element.pyx 2020-02-27 10:40:29.052964694 -0700
+@@ -355,7 +355,7 @@ cdef class LocalGenericElement(Commutati
+ return ans
+
+ def _latex_(self):
+- """
++ r"""
+ Returns a latex representation of self.
+
+ EXAMPLES::
+diff -up src/sage/rings/padics/morphism.pyx.orig src/sage/rings/padics/morphism.pyx
+--- src/sage/rings/padics/morphism.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/morphism.pyx 2020-02-27 14:31:55.331074487 -0700
+@@ -280,7 +280,7 @@ cdef class FrobeniusEndomorphism_padics(
+
+
+ def __hash__(self):
+- """
++ r"""
+ Return a hash of this morphism.
+
+ It is the hash of ``(domain, codomain, ('Frob', power)``
+diff -up src/sage/rings/padics/padic_capped_absolute_element.pyx.orig src/sage/rings/padics/padic_capped_absolute_element.pyx
+--- src/sage/rings/padics/padic_capped_absolute_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_capped_absolute_element.pyx 2020-02-27 10:48:47.499131689 -0700
+@@ -383,7 +383,7 @@ cdef class pAdicCappedAbsoluteElement(CA
+ return ans
+
+ def _exp_binary_splitting(self, aprec):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+@@ -443,7 +443,7 @@ cdef class pAdicCappedAbsoluteElement(CA
+ return ans
+
+ def _exp_newton(self, aprec, log_algorithm=None):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+diff -up src/sage/rings/padics/padic_capped_relative_element.pyx.orig src/sage/rings/padics/padic_capped_relative_element.pyx
+--- src/sage/rings/padics/padic_capped_relative_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_capped_relative_element.pyx 2020-02-27 10:45:06.545045373 -0700
+@@ -250,7 +250,7 @@ cdef class pAdicCappedRelativeElement(CR
+ return self.lift_c()
+
+ def residue(self, absprec=1, field=None, check_prec=True):
+- """
++ r"""
+ Reduces this element modulo `p^{\mathrm{absprec}}`.
+
+ INPUT:
+@@ -436,7 +436,7 @@ cdef class pAdicCappedRelativeElement(CR
+ return ans
+
+ def _exp_binary_splitting(self, aprec):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+@@ -498,7 +498,7 @@ cdef class pAdicCappedRelativeElement(CR
+ return ans
+
+ def _exp_newton(self, aprec, log_algorithm=None):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+diff -up src/sage/rings/padics/padic_ext_element.pyx.orig src/sage/rings/padics/padic_ext_element.pyx
+--- src/sage/rings/padics/padic_ext_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_ext_element.pyx 2020-02-26 12:37:01.119373785 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ p-Adic Extension Element
+
+ A common superclass for all elements of extension rings and field of `\ZZ_p` and
+diff -up src/sage/rings/padics/padic_fixed_mod_element.pyx.orig src/sage/rings/padics/padic_fixed_mod_element.pyx
+--- src/sage/rings/padics/padic_fixed_mod_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_fixed_mod_element.pyx 2020-02-27 10:47:41.918293107 -0700
+@@ -157,7 +157,7 @@ cdef class pAdicFixedModElement(FMElemen
+ return self.lift_c()
+
+ cdef lift_c(self):
+- """
++ r"""
+ Returns an integer congruent to this element modulo the precision.
+
+ .. WARNING::
+@@ -227,7 +227,7 @@ cdef class pAdicFixedModElement(FMElemen
+ holder.value)
+
+ def _integer_(self, Z=None):
+- """
++ r"""
+ Return an integer congruent to ``self`` modulo the precision.
+
+ .. WARNING::
+@@ -449,7 +449,7 @@ cdef class pAdicFixedModElement(FMElemen
+ return ans
+
+ def _exp_binary_splitting(self, aprec):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+@@ -508,7 +508,7 @@ cdef class pAdicFixedModElement(FMElemen
+ return ans
+
+ def _exp_newton(self, aprec, log_algorithm=None):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+diff -up src/sage/rings/padics/padic_floating_point_element.pyx.orig src/sage/rings/padics/padic_floating_point_element.pyx
+--- src/sage/rings/padics/padic_floating_point_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_floating_point_element.pyx 2020-02-27 10:46:09.415931306 -0700
+@@ -238,7 +238,7 @@ cdef class pAdicFloatingPointElement(FPE
+ return self.lift_c()
+
+ def residue(self, absprec=1, field=None, check_prec=False):
+- """
++ r"""
+ Reduces this element modulo `p^{\mathrm{absprec}}`.
+
+ INPUT:
+@@ -321,7 +321,7 @@ cdef class pAdicFloatingPointElement(FPE
+ return Mod(selfvalue, modulus)
+
+ def _exp_binary_splitting(self, aprec):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+@@ -382,7 +382,7 @@ cdef class pAdicFloatingPointElement(FPE
+ return ans
+
+ def _exp_newton(self, aprec, log_algorithm=None):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+diff -up src/sage/rings/padics/padic_generic_element.pyx.orig src/sage/rings/padics/padic_generic_element.pyx
+--- src/sage/rings/padics/padic_generic_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_generic_element.pyx 2020-02-27 10:43:44.418501293 -0700
+@@ -543,7 +543,7 @@ cdef class pAdicGenericElement(LocalGene
+ return self._repr_(mode=mode)
+
+ def _repr_(self, mode=None, do_latex=False):
+- """
++ r"""
+ Returns a string representation of this element.
+
+ INPUT:
+@@ -3039,7 +3039,7 @@ cdef class pAdicGenericElement(LocalGene
+ return series_unit*nfactorial_unit.inverse_of_unit()<<(series_val-nfactorial_val)
+
+ def _exp_binary_splitting(self, aprec):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+@@ -3085,7 +3085,7 @@ cdef class pAdicGenericElement(LocalGene
+ raise NotImplementedError("The binary splitting algorithm is not implemented for the parent: %s" % self.parent())
+
+ def _exp_newton(self, aprec, log_algorithm=None):
+- """
++ r"""
+ Compute the exponential power series of this element
+
+ This is a helper method for :meth:`exp`.
+@@ -3763,7 +3763,7 @@ cdef class pAdicGenericElement(LocalGene
+ return parent(root)
+
+ def _inverse_pth_root(self, twist=None, hint=None):
+- """
++ r"""
+ In its simplest form, computes the inverse of
+ ``p``-th root of this element.
+
+@@ -4106,7 +4106,7 @@ cdef class pAdicGenericElement(LocalGene
+ return (H[n](z - 1) - ((z.log(0))**(n-1)*(1 - z).log(0))/Integer(n-1).factorial()).add_bigoh(N)
+
+ def polylog(self, n):
+- """
++ r"""
+ Return `Li_n(self)` , the `n`th `p`-adic polylogarithm of this element.
+
+ INPUT:
+@@ -4359,7 +4359,7 @@ def _polylog_c(n, p):
+ return p/(p-1) - (n-1)/p.log() + (n-1)*(n*(p-1)/p.log()).log(p) + (2*p*(p-1)*n/p.log()).log(p)
+
+ def _findprec(c_1, c_2, c_3, p):
+- """
++ r"""
+ Return an integer k such that c_1*k - c_2*log_p(k) > c_3.
+ This is an internal function, used by :meth:`polylog`.
+
+@@ -4389,7 +4389,7 @@ def _findprec(c_1, c_2, c_3, p):
+ k += 1
+
+ def _compute_g(p, n, prec, terms):
+- """
++ r"""
+ Return the list of power series `g_i = \int(-g_{i-1}/(v-v^2))` used in the computation of polylogarithms.
+ This is an internal function, used by :meth:`polylog`.
+
+diff -up src/sage/rings/padics/padic_template_element.pxi.orig src/sage/rings/padics/padic_template_element.pxi
+--- src/sage/rings/padics/padic_template_element.pxi.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_template_element.pxi 2020-02-27 10:49:59.029864892 -0700
+@@ -612,7 +612,7 @@ cdef class pAdicTemplateElement(pAdicGen
+ return trim_zeros(list(self.unit_part().expansion(lift_mode='smallest')))
+
+ cpdef pAdicTemplateElement unit_part(self):
+- """
++ r"""
+ Returns the unit part of this element.
+
+ This is the `p`-adic element `u` in the same ring so that this
+diff -up src/sage/rings/padics/padic_ZZ_pX_CA_element.pyx.orig src/sage/rings/padics/padic_ZZ_pX_CA_element.pyx
+--- src/sage/rings/padics/padic_ZZ_pX_CA_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_ZZ_pX_CA_element.pyx 2020-02-26 12:41:30.300414798 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ `p`-Adic ``ZZ_pX`` CA Element
+
+ This file implements elements of Eisenstein and unramified extensions
+@@ -1539,7 +1539,7 @@ cdef class pAdicZZpXCAElement(pAdicZZpXE
+ return self.to_fraction_field() * (~right)
+
+ def _integer_(self, Z=None):
+- """
++ r"""
+ Returns an integer congruent to this element modulo
+ `\pi`^``self.absolute_precision()``, if possible.
+
+@@ -1935,7 +1935,7 @@ cdef class pAdicZZpXCAElement(pAdicZZpXE
+ return [zero] * ordp + ulist
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/rings/padics/padic_ZZ_pX_CR_element.pyx.orig src/sage/rings/padics/padic_ZZ_pX_CR_element.pyx
+--- src/sage/rings/padics/padic_ZZ_pX_CR_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_ZZ_pX_CR_element.pyx 2020-02-26 12:40:01.838037825 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ `p`-Adic ``ZZ_pX`` CR Element
+
+ This file implements elements of Eisenstein and unramified extensions
+@@ -224,7 +224,7 @@ cdef inline int check_ordp(long a) excep
+
+ cdef class pAdicZZpXCRElement(pAdicZZpXElement):
+ def __init__(self, parent, x, absprec = infinity, relprec = infinity, empty = False):
+- """
++ r"""
+ Creates an element of a capped relative precision, unramified
+ or Eisenstein extension of `\ZZ_p` or `\QQ_p`.
+
+@@ -2298,7 +2298,7 @@ cdef class pAdicZZpXCRElement(pAdicZZpXE
+ return ans
+
+ def _integer_(self, Z=None):
+- """
++ r"""
+ Return an integer congruent to this element modulo
+ `\pi`^``self.absolute_precision()``, if possible
+
+@@ -2796,7 +2796,7 @@ cdef class pAdicZZpXCRElement(pAdicZZpXE
+ return ulist
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Return the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/rings/padics/padic_ZZ_pX_element.pyx.orig src/sage/rings/padics/padic_ZZ_pX_element.pyx
+--- src/sage/rings/padics/padic_ZZ_pX_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_ZZ_pX_element.pyx 2020-02-26 12:38:14.111019390 -0700
+@@ -344,7 +344,7 @@ cdef class pAdicZZpXElement(pAdicExtElem
+ return ans
+
+ def norm(self, base=None):
+- """
++ r"""
+ Return the absolute or relative norm of this element.
+
+ NOTE! This is not the `p`-adic absolute value. This is a
+@@ -420,7 +420,7 @@ cdef class pAdicZZpXElement(pAdicExtElem
+ return self.parent().ground_ring()(self.unit_part().matrix_mod_pn().det()) * norm_of_uniformizer**self.valuation()
+
+ def trace(self, base = None):
+- """
++ r"""
+ Return the absolute or relative trace of this element.
+
+ If ``base`` is given then ``base`` must be a subfield of the
+diff -up src/sage/rings/padics/padic_ZZ_pX_FM_element.pyx.orig src/sage/rings/padics/padic_ZZ_pX_FM_element.pyx
+--- src/sage/rings/padics/padic_ZZ_pX_FM_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/padic_ZZ_pX_FM_element.pyx 2020-02-26 12:43:41.091000479 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ `p`-Adic ``ZZ_pX`` FM Element
+
+ This file implements elements of Eisenstein and unramified extensions
+@@ -149,7 +149,7 @@ from sage.rings.padics.pow_computer_ext
+
+ cdef class pAdicZZpXFMElement(pAdicZZpXElement):
+ def __init__(self, parent, x, absprec=None, relprec=None, empty=False):
+- """
++ r"""
+ Creates an element of a fixed modulus, unramified or
+ eisenstein extension of `\ZZ_p` or `\QQ_p`.
+
+@@ -902,7 +902,7 @@ cdef class pAdicZZpXFMElement(pAdicZZpXE
+ return ans
+
+ def add_bigoh(self, absprec):
+- """
++ r"""
+ Return a new element truncated modulo \pi^absprec.
+
+ This is only implemented for unramified extension at
+@@ -949,7 +949,7 @@ cdef class pAdicZZpXFMElement(pAdicZZpXE
+ return ans
+
+ def _integer_(self, Z=None):
+- """
++ r"""
+ Returns an integer congruent to this element modulo
+ `\pi` ^ ``self.absolute_precision()``, if possible.
+
+@@ -980,7 +980,7 @@ cdef class pAdicZZpXFMElement(pAdicZZpXE
+ return ans
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the \emph{rows} of this matrix give the
+@@ -1041,7 +1041,7 @@ cdef class pAdicZZpXFMElement(pAdicZZpXE
+ # raise NotImplementedError
+
+ def norm(self, base = None):
+- """
++ r"""
+ Return the absolute or relative norm of this element.
+
+ NOTE! This is not the `p`-adic absolute value. This is a
+@@ -1078,7 +1078,7 @@ cdef class pAdicZZpXFMElement(pAdicZZpXE
+ return self.parent().ground_ring()(self.unit_part().matrix_mod_pn().det()) * norm_of_uniformizer**self.valuation()
+
+ def trace(self, base = None):
+- """
++ r"""
+ Return the absolute or relative trace of this element.
+
+ If `K` is given then `K` must be a subfield of the parent `L` of
+diff -up src/sage/rings/padics/pow_computer_ext.pyx.orig src/sage/rings/padics/pow_computer_ext.pyx
+--- src/sage/rings/padics/pow_computer_ext.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/pow_computer_ext.pyx 2020-02-27 14:23:35.369082319 -0700
+@@ -1248,7 +1248,7 @@ cdef class PowComputer_ZZ_pX(PowComputer
+ return 0
+
+ cdef class PowComputer_ZZ_pX_FM(PowComputer_ZZ_pX):
+- """
++ r"""
+ This class only caches a context and modulus for p^prec_cap.
+
+ Designed for use with fixed modulus p-adic rings, in Eisenstein
+diff -up src/sage/rings/padics/qadic_flint_CA.pyx.orig src/sage/rings/padics/qadic_flint_CA.pyx
+--- src/sage/rings/padics/qadic_flint_CA.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/qadic_flint_CA.pyx 2020-02-27 14:24:22.319239812 -0700
+@@ -27,7 +27,7 @@ cdef class qAdicCappedAbsoluteElement(CA
+ norm = norm_unram
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/rings/padics/qadic_flint_CR.pyx.orig src/sage/rings/padics/qadic_flint_CR.pyx
+--- src/sage/rings/padics/qadic_flint_CR.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/qadic_flint_CR.pyx 2020-02-27 14:28:41.772583958 -0700
+@@ -27,7 +27,7 @@ cdef class qAdicCappedRelativeElement(CR
+ norm = norm_unram
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/rings/padics/qadic_flint_FM.pyx.orig src/sage/rings/padics/qadic_flint_FM.pyx
+--- src/sage/rings/padics/qadic_flint_FM.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/qadic_flint_FM.pyx 2020-02-27 14:29:11.364052944 -0700
+@@ -27,7 +27,7 @@ cdef class qAdicFixedModElement(FMElemen
+ norm = norm_unram
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/rings/padics/qadic_flint_FP.pyx.orig src/sage/rings/padics/qadic_flint_FP.pyx
+--- src/sage/rings/padics/qadic_flint_FP.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/padics/qadic_flint_FP.pyx 2020-02-27 14:25:28.424053567 -0700
+@@ -27,7 +27,7 @@ cdef class qAdicFloatingPointElement(FPE
+ norm = norm_unram
+
+ def matrix_mod_pn(self):
+- """
++ r"""
+ Returns the matrix of right multiplication by the element on
+ the power basis `1, x, x^2, \ldots, x^{d-1}` for this
+ extension field. Thus the *rows* of this matrix give the
+diff -up src/sage/rings/polynomial/cyclotomic.pyx.orig src/sage/rings/polynomial/cyclotomic.pyx
+--- src/sage/rings/polynomial/cyclotomic.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/cyclotomic.pyx 2020-02-27 14:43:20.186376927 -0700
+@@ -193,7 +193,7 @@ def cyclotomic_coeffs(nn, sparse=None):
+ return L
+
+ def cyclotomic_value(n, x):
+- """
++ r"""
+ Return the value of the `n`-th cyclotomic polynomial evaluated at `x`.
+
+ INPUT:
+diff -up src/sage/rings/polynomial/laurent_polynomial.pyx.orig src/sage/rings/polynomial/laurent_polynomial.pyx
+--- src/sage/rings/polynomial/laurent_polynomial.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/laurent_polynomial.pyx 2020-02-27 14:42:24.611430268 -0700
+@@ -237,7 +237,7 @@ cdef class LaurentPolynomial(Commutative
+
+
+ cdef class LaurentPolynomial_univariate(LaurentPolynomial):
+- """
++ r"""
+ A univariate Laurent polynomial in the form of `t^n \cdot f`
+ where `f` is a polynomial in `t`.
+
+diff -up src/sage/rings/polynomial/multi_polynomial_libsingular.pyx.orig src/sage/rings/polynomial/multi_polynomial_libsingular.pyx
+--- src/sage/rings/polynomial/multi_polynomial_libsingular.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/multi_polynomial_libsingular.pyx 2020-02-26 12:49:19.224880230 -0700
+@@ -2075,7 +2075,7 @@ cdef class MPolynomial_libsingular(MPoly
+ return new_MP(P, _p)
+
+ def __call__(self, *x, **kwds):
+- """
++ r"""
+ Evaluate this multi-variate polynomial at ``x``, where ``x``
+ is either the tuple of values to substitute in, or one can use
+ functional notation ``f(a_0,a_1,a_2, \ldots)`` to evaluate
+@@ -2344,7 +2344,7 @@ cdef class MPolynomial_libsingular(MPoly
+ return new_MP((<MPolynomial_libsingular>left)._parent,_p)
+
+ cpdef _div_(left, right_ringelement):
+- """
++ r"""
+ Divide left by right
+
+ EXAMPLES::
+@@ -2559,7 +2559,7 @@ cdef class MPolynomial_libsingular(MPoly
+ return char_to_str(s)
+
+ def _latex_(self):
+- """
++ r"""
+ Return a polynomial LaTeX representation of this polynomial.
+
+ EXAMPLES::
+@@ -4500,7 +4500,7 @@ cdef class MPolynomial_libsingular(MPoly
+ return Sequence(l, check=False, immutable=True)
+
+ def reduce(self,I):
+- """
++ r"""
+ Return a remainder of this polynomial modulo the
+ polynomials in ``I``.
+
+@@ -5219,7 +5219,7 @@ cdef class MPolynomial_libsingular(MPoly
+ return new_MP(self._parent,p)
+
+ def integral(self, MPolynomial_libsingular var):
+- """
++ r"""
+ Integrates this polynomial with respect to the provided
+ variable.
+
+diff -up src/sage/rings/polynomial/multi_polynomial.pyx.orig src/sage/rings/polynomial/multi_polynomial.pyx
+--- src/sage/rings/polynomial/multi_polynomial.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/multi_polynomial.pyx 2020-02-27 11:00:30.479716969 -0700
+@@ -209,7 +209,7 @@ cdef class MPolynomial(CommutativeRingEl
+ return R([self])
+
+ def coefficients(self):
+- """
++ r"""
+ Return the nonzero coefficients of this polynomial in a list.
+ The returned list is decreasingly ordered by the term ordering
+ of ``self.parent()``, i.e. the list of coefficients matches the list
+@@ -1224,7 +1224,7 @@ cdef class MPolynomial(CommutativeRingEl
+ return R(dict([(k,f(v)) for (k,v) in self.dict().items()]))
+
+ def _norm_over_nonprime_finite_field(self):
+- """
++ r"""
+ Given a multivariate polynomial over a nonprime finite field
+ `\GF{p**e}`, compute the norm of the polynomial down to `\GF{p}`, which
+ is the product of the conjugates by the Frobenius action on
+diff -up src/sage/rings/polynomial/pbori.pyx.orig src/sage/rings/polynomial/pbori.pyx
+--- src/sage/rings/polynomial/pbori.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/pbori.pyx 2020-02-27 10:58:59.991311061 -0700
+@@ -1362,7 +1362,7 @@ cdef class BooleanPolynomialRing(MPolyno
+ return R
+
+ def defining_ideal(self):
+- """
++ r"""
+ Return `I = <x_i^2 + x_i> \subset R` where ``R =
+ self.cover_ring()``, and `x_i` any element in the set of
+ variables of this ring.
+diff -up src/sage/rings/polynomial/plural.pyx.orig src/sage/rings/polynomial/plural.pyx
+--- src/sage/rings/polynomial/plural.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/plural.pyx 2020-02-26 12:46:32.801795133 -0700
+@@ -250,7 +250,7 @@ cdef class NCPolynomialRing_plural(Ring)
+
+ """
+ def __init__(self, base_ring, names, c, d, order, category, check=True):
+- """
++ r"""
+ Construct a noncommutative polynomial G-algebra subject to the following conditions:
+
+ INPUT:
+diff -up src/sage/rings/polynomial/polynomial_element.pyx.orig src/sage/rings/polynomial/polynomial_element.pyx
+--- src/sage/rings/polynomial/polynomial_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/polynomial_element.pyx 2020-02-27 10:56:29.731958111 -0700
+@@ -2654,8 +2654,8 @@ cdef class Polynomial(CommutativeAlgebra
+ var = ""
+ s += "%s %s" % (x, var)
+ s = s.replace(" + -", " - ")
+- s = re.sub(" 1(\.0+)? \|"," ", s)
+- s = re.sub(" -1(\.0+)? \|", " -", s)
++ s = re.sub(r" 1(\.0+)? \|"," ", s)
++ s = re.sub(r" -1(\.0+)? \|", " -", s)
+ s = s.replace("|","")
+ if s == " ":
+ return "0"
+@@ -2755,7 +2755,7 @@ cdef class Polynomial(CommutativeAlgebra
+ raise IndexError("polynomials are immutable")
+
+ cpdef _floordiv_(self, right):
+- """
++ r"""
+ Quotient of division of self by other. This is denoted //.
+
+ If self = quotient \* right + remainder, this function returns
+@@ -4795,7 +4795,7 @@ cdef class Polynomial(CommutativeAlgebra
+ return ~(q.leading_coefficient())*q # make monic (~ is inverse in python)
+
+ def is_primitive(self, n=None, n_prime_divs=None):
+- """
++ r"""
+ Return ``True`` if the polynomial is primitive. The semantics of
+ "primitive" depend on the polynomial coefficients.
+
+@@ -6385,8 +6385,8 @@ cdef class Polynomial(CommutativeAlgebra
+ where the roots `a` and `b` are to be considered in the algebraic
+ closure of the fraction field of the coefficients and counted with
+ multiplicities. If the polynomials are not monic this quantity is
+- multiplied by `\\alpha_1^{deg(p_2)} \\alpha_2^{deg(p_1)}` where
+- `\\alpha_1` and `\\alpha_2` are the leading coefficients of `p_1` and
++ multiplied by `\alpha_1^{deg(p_2)} \alpha_2^{deg(p_1)}` where
++ `\alpha_1` and `\alpha_2` are the leading coefficients of `p_1` and
+ `p_2` respectively.
+
+ INPUT:
+diff -up src/sage/rings/polynomial/polynomial_gf2x.pyx.orig src/sage/rings/polynomial/polynomial_gf2x.pyx
+--- src/sage/rings/polynomial/polynomial_gf2x.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/polynomial_gf2x.pyx 2020-02-27 14:35:51.159778076 -0700
+@@ -101,7 +101,7 @@ cdef class Polynomial_GF2X(Polynomial_te
+ return pari(self.list()).Polrev(variable) * pari(1).Mod(2)
+
+ def modular_composition(Polynomial_GF2X self, Polynomial_GF2X g, Polynomial_GF2X h, algorithm=None):
+- """
++ r"""
+ Compute `f(g) \pmod h`.
+
+ Both implementations use Brent-Kung's Algorithm 2.1 (*Fast Algorithms
+diff -up src/sage/rings/polynomial/polynomial_integer_dense_flint.pyx.orig src/sage/rings/polynomial/polynomial_integer_dense_flint.pyx
+--- src/sage/rings/polynomial/polynomial_integer_dense_flint.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/polynomial_integer_dense_flint.pyx 2020-02-27 14:40:21.060772018 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense univariate polynomials over `\ZZ`, implemented using FLINT.
+
+ AUTHORS:
+@@ -1350,7 +1350,7 @@ cdef class Polynomial_integer_dense_flin
+ return smallInteger(fmpz_poly_degree(self.__poly))
+
+ def pseudo_divrem(self, B):
+- """
++ r"""
+ Write ``A = self``. This function computes polynomials `Q` and `R`
+ and an integer `d` such that
+
+diff -up src/sage/rings/polynomial/polynomial_modn_dense_ntl.pyx.orig src/sage/rings/polynomial/polynomial_modn_dense_ntl.pyx
+--- src/sage/rings/polynomial/polynomial_modn_dense_ntl.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/polynomial_modn_dense_ntl.pyx 2020-02-27 14:36:40.134885830 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense univariate polynomials over `\ZZ/n\ZZ`, implemented using NTL.
+
+ This implementation is generally slower than the FLINT implementation in
+diff -up src/sage/rings/polynomial/polynomial_zmod_flint.pyx.orig src/sage/rings/polynomial/polynomial_zmod_flint.pyx
+--- src/sage/rings/polynomial/polynomial_zmod_flint.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/polynomial_zmod_flint.pyx 2020-02-27 14:40:56.729095964 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Dense univariate polynomials over `\ZZ/n\ZZ`, implemented using FLINT.
+
+ This module gives a fast implementation of `(\ZZ/n\ZZ)[x]` whenever `n` is at
+diff -up src/sage/rings/polynomial/real_roots.pyx.orig src/sage/rings/polynomial/real_roots.pyx
+--- src/sage/rings/polynomial/real_roots.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/real_roots.pyx 2020-02-27 14:38:08.079283628 -0700
+@@ -1252,7 +1252,7 @@ def de_casteljau_intvec(Vector_integer_d
+ cdef double half_ulp = ldexp(1.0 * 65/64, -54)
+
+ def intvec_to_doublevec(Vector_integer_dense b, long err):
+- """
++ r"""
+ Given a vector of integers A = [a1, ..., an], and an integer
+ error bound E, returns a vector of floating-point numbers
+ B = [b1, ..., bn], lower and upper error bounds F1 and F2, and
+@@ -2142,7 +2142,7 @@ def subsample_vec_doctest(a, slen, llen)
+ return subsample_vec(a, slen, llen)
+
+ def maximum_root_first_lambda(p):
+- """
++ r"""
+ Given a polynomial with real coefficients, computes an upper bound
+ on its largest real root, using the first-\lambda algorithm from
+ "Implementations of a New Theorem for Computing Bounds for Positive
+diff -up src/sage/rings/polynomial/skew_polynomial_element.pyx.orig src/sage/rings/polynomial/skew_polynomial_element.pyx
+--- src/sage/rings/polynomial/skew_polynomial_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/skew_polynomial_element.pyx 2020-02-27 11:01:57.406185634 -0700
+@@ -1649,8 +1649,8 @@ cdef class SkewPolynomial(AlgebraElement
+ var = ""
+ s += "%s %s"%(x,var)
+ s = s.replace(" + -", " - ")
+- s = re.sub(" 1(\.0+)? \|"," ", s)
+- s = re.sub(" -1(\.0+)? \|", " -", s)
++ s = re.sub(r" 1(\.0+)? \|"," ", s)
++ s = re.sub(r" -1(\.0+)? \|", " -", s)
+ s = s.replace("|","")
+ if s == " ":
+ return "0"
+diff -up src/sage/rings/polynomial/symmetric_reduction.pyx.orig src/sage/rings/polynomial/symmetric_reduction.pyx
+--- src/sage/rings/polynomial/symmetric_reduction.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/polynomial/symmetric_reduction.pyx 2020-02-27 10:57:19.593079736 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Symmetric Reduction of Infinite Polynomials
+
+ :class:`~sage.rings.polynomial.symmetric_reduction.SymmetricReductionStrategy`
+diff -up src/sage/rings/quotient_ring.py.orig src/sage/rings/quotient_ring.py
+--- src/sage/rings/quotient_ring.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/quotient_ring.py 2020-02-26 12:35:50.055692397 -0700
+@@ -1298,7 +1298,7 @@ class QuotientRing_generic(QuotientRing_
+ QuotientRing_nc.__init__(self, R, I, names, category=category)
+
+ def _macaulay2_init_(self, macaulay2=None):
+- """
++ r"""
+ EXAMPLES:
+
+ Quotients of multivariate polynomial rings over `\QQ`, `\ZZ` and
+diff -up src/sage/rings/rational.pyx.orig src/sage/rings/rational.pyx
+--- src/sage/rings/rational.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/rational.pyx 2020-02-26 12:26:09.151654850 -0700
+@@ -1719,7 +1719,7 @@ cdef class Rational(sage.structure.eleme
+ return self.numer().squarefree_part() * self.denom().squarefree_part()
+
+ def is_padic_square(self, p, check=True):
+- """
++ r"""
+ Determines whether this rational number is a square in `\QQ_p` (or in
+ `R` when ``p = infinity``).
+
+diff -up src/sage/rings/real_arb.pyx.orig src/sage/rings/real_arb.pyx
+--- src/sage/rings/real_arb.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/real_arb.pyx 2020-02-27 10:39:29.670017427 -0700
+@@ -234,7 +234,7 @@ from sage.structure.unique_representatio
+ from sage.cpython.string cimport char_to_str, str_to_bytes
+
+ cdef void mpfi_to_arb(arb_t target, const mpfi_t source, const long precision):
+- """
++ r"""
+ Convert an MPFI interval to an Arb ball.
+
+ INPUT:
+@@ -278,7 +278,7 @@ cdef void mpfi_to_arb(arb_t target, cons
+ mpfr_clear(right)
+
+ cdef int arb_to_mpfi(mpfi_t target, arb_t source, const long precision) except -1:
+- """
++ r"""
+ Convert an Arb ball to an MPFI interval.
+
+ INPUT:
+@@ -771,7 +771,7 @@ class RealBallField(UniqueRepresentation
+ # Ball functions of non-ball arguments
+
+ def sinpi(self, x):
+- """
++ r"""
+ Return a ball enclosing `\sin(\pi x)`.
+
+ This works even if ``x`` itself is not a ball, and may be faster or
+@@ -817,7 +817,7 @@ class RealBallField(UniqueRepresentation
+ return res
+
+ def cospi(self, x):
+- """
++ r"""
+ Return a ball enclosing `\cos(\pi x)`.
+
+ This works even if ``x`` itself is not a ball, and may be faster or
+@@ -2912,7 +2912,7 @@ cdef class RealBall(RingElement):
+ return res
+
+ def sqrt1pm1(self):
+- """
++ r"""
+ Return `\sqrt{1+\mathrm{self}}-1`, computed accurately when ``self`` is
+ close to zero.
+
+@@ -3493,7 +3493,7 @@ cdef class RealBall(RingElement):
+ return res
+
+ def rising_factorial(self, n):
+- """
++ r"""
+ Return the ``n``-th rising factorial of this ball.
+
+ The `n`-th rising factorial of `x` is equal to `x (x+1) \cdots (x+n-1)`.
+@@ -3595,7 +3595,7 @@ cdef class RealBall(RingElement):
+ return res
+
+ def polylog(self, s):
+- """
++ r"""
+ Return the polylogarithm `\operatorname{Li}_s(\mathrm{self})`.
+
+ EXAMPLES::
+diff -up src/sage/rings/real_double.pyx.orig src/sage/rings/real_double.pyx
+--- src/sage/rings/real_double.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/real_double.pyx 2020-02-27 10:18:35.746129544 -0700
+@@ -2079,7 +2079,7 @@ cdef class RealDoubleElement(FieldElemen
+ return a
+
+ def log(self, base=None):
+- """
++ r"""
+ Return the logarithm.
+
+ INPUT:
+@@ -2255,7 +2255,7 @@ cdef class RealDoubleElement(FieldElemen
+ return a
+
+ def exp2(self):
+- """
++ r"""
+ Return `2^\mathtt{self}`.
+
+ EXAMPLES::
+diff -up src/sage/rings/real_mpfi.pyx.orig src/sage/rings/real_mpfi.pyx
+--- src/sage/rings/real_mpfi.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/real_mpfi.pyx 2020-02-27 10:14:36.381371499 -0700
+@@ -1307,7 +1307,7 @@ cdef class RealIntervalFieldElement(Ring
+ return self.str(10)
+
+ def _latex_(self):
+- """
++ r"""
+ Return a latex representation of ``self``.
+
+ EXAMPLES::
+@@ -4406,7 +4406,7 @@ cdef class RealIntervalFieldElement(Ring
+ return x
+
+ def exp2(self):
+- """
++ r"""
+ Returns `2^\mathtt{self}`
+
+ EXAMPLES::
+diff -up src/sage/rings/real_mpfr.pyx.orig src/sage/rings/real_mpfr.pyx
+--- src/sage/rings/real_mpfr.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/real_mpfr.pyx 2020-02-27 10:16:40.188177426 -0700
+@@ -3896,7 +3896,7 @@ cdef class RealNumber(sage.structure.ele
+ return mpfr_inf_p(self.value) and mpfr_sgn(self.value) < 0
+
+ def is_infinity(self):
+- """
++ r"""
+ Return ``True`` if ``self`` is `\infty` and ``False`` otherwise.
+
+ EXAMPLES::
+diff -up src/sage/rings/semirings/tropical_semiring.pyx.orig src/sage/rings/semirings/tropical_semiring.pyx
+--- src/sage/rings/semirings/tropical_semiring.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/semirings/tropical_semiring.pyx 2020-02-27 11:04:01.364022751 -0700
+@@ -99,7 +99,7 @@ cdef class TropicalSemiringElement(Eleme
+ return repr(self._val)
+
+ def _latex_(self):
+- """
++ r"""
+ Return a latex representation of ``self``.
+
+ EXAMPLES::
+@@ -135,7 +135,7 @@ cdef class TropicalSemiringElement(Eleme
+
+ # Comparisons
+ cpdef _richcmp_(left, right, int op):
+- """
++ r"""
+ Return the standard comparison of ``left`` and ``right``.
+
+ EXAMPLES::
+@@ -259,7 +259,7 @@ cdef class TropicalSemiringElement(Eleme
+ return x
+
+ def __neg__(self):
+- """
++ r"""
+ Return the additive inverse, which only exists for `\infty`.
+
+ EXAMPLES::
+@@ -610,7 +610,7 @@ class TropicalSemiring(Parent, UniqueRep
+
+ @cached_method
+ def zero(self):
+- """
++ r"""
+ Return the (tropical) additive identity element `+\infty`.
+
+ EXAMPLES::
+diff -up src/sage/rings/tate_algebra_element.pyx.orig src/sage/rings/tate_algebra_element.pyx
+--- src/sage/rings/tate_algebra_element.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/rings/tate_algebra_element.pyx 2020-02-27 14:14:01.439381378 -0700
+@@ -1521,7 +1521,7 @@ cdef class TateAlgebraElement(Commutativ
+ return True
+
+ def __pow__(self, exponent, modulus):
+- """
++ r"""
+ Return this element raised to the power ``exponent``.
+
+ INPUT:
+@@ -2433,7 +2433,7 @@ cdef class TateAlgebraElement(Commutativ
+ return self._prec - self.valuation()
+
+ def log(self, prec=None):
+- """
++ r"""
+ Return the logarithm of this series.
+
+ INPUT:
+@@ -2590,7 +2590,7 @@ cdef class TateAlgebraElement(Commutativ
+ return total.add_bigoh(aprec)
+
+ def exp(self, prec=None):
+- """
++ r"""
+ Return the exponential of this series.
+
+ INPUT:
+@@ -3343,7 +3343,7 @@ cdef class TateAlgebraElement(Commutativ
+
+ @coerce_binop
+ def Spoly(self, other):
+- """
++ r"""
+ Return the S-polynomial of this series and ``other``.
+
+ INPUT:
+diff -up src/sage/structure/coerce_maps.pyx.orig src/sage/structure/coerce_maps.pyx
+--- src/sage/structure/coerce_maps.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/structure/coerce_maps.pyx 2020-02-27 11:52:18.843646230 -0700
+@@ -312,7 +312,7 @@ cdef class NamedConvertMap(Map):
+
+ cdef class CallableConvertMap(Map):
+ def __init__(self, domain, codomain, func, parent_as_first_arg=None):
+- """
++ r"""
+ This lets one easily create maps from any callable object.
+
+ This is especially useful to create maps from bound methods.
+diff -up src/sage/symbolic/expression.pyx.orig src/sage/symbolic/expression.pyx
+--- src/sage/symbolic/expression.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/symbolic/expression.pyx 2020-02-27 09:30:14.669819391 -0700
+@@ -610,7 +610,7 @@ cdef class Expression(CommutativeRingEle
+ return new_Expression_from_GEx(self._parent, self._gobj)
+
+ def _repr_(self):
+- """
++ r"""
+ Return string representation of this symbolic expression.
+
+ EXAMPLES::
+@@ -3632,7 +3632,7 @@ cdef class Expression(CommutativeRingEle
+ return 1/self
+
+ cpdef int _cmp_(left, right) except -2:
+- """
++ r"""
+ Compare self and right, returning -1, 0, or 1, depending on if
+ self < right, self == right, or self > right, respectively.
+
+@@ -3868,7 +3868,7 @@ cdef class Expression(CommutativeRingEle
+ return print_order_compare_mul(left._gobj, right._gobj)
+
+ cpdef _pow_(self, other):
+- """
++ r"""
+ Return ``self`` raised to the power ``other``.
+
+ OUTPUT: a symbolic expression
+@@ -4743,7 +4743,7 @@ cdef class Expression(CommutativeRingEle
+ expand_rational = rational_expand = expand
+
+ def expand_trig(self, full=False, half_angles=False, plus=True, times=True):
+- """
++ r"""
+ Expand trigonometric and hyperbolic functions of sums of angles
+ and of multiple angles occurring in self. For best results, self
+ should already be expanded.
+@@ -7263,7 +7263,7 @@ cdef class Expression(CommutativeRingEle
+ return new_Expression_from_GEx(self._parent, x)
+
+ def gosper_term(self, n):
+- """
++ r"""
+ Return Gosper's hypergeometric term for ``self``.
+
+ Suppose ``f``=``self`` is a hypergeometric term such that:
+diff -up src/sage/symbolic/function.pyx.orig src/sage/symbolic/function.pyx
+--- src/sage/symbolic/function.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/symbolic/function.pyx 2020-02-27 15:06:07.634817327 -0700
+@@ -1565,7 +1565,7 @@ cdef class DeprecatedSFunction(SymbolicF
+ evalf_params_first, pickled_functions))
+
+ def __setstate__(self, state):
+- """
++ r"""
+ EXAMPLES::
+
+ sage: from sage.symbolic.function import DeprecatedSFunction
+diff -up src/sage/symbolic/ring.pyx.orig src/sage/symbolic/ring.pyx
+--- src/sage/symbolic/ring.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/symbolic/ring.pyx 2020-02-27 15:08:09.648492686 -0700
+@@ -86,7 +86,7 @@ cdef class SymbolicRing(CommutativeRing)
+ return "Symbolic Ring"
+
+ def _latex_(self):
+- """
++ r"""
+ Return latex representation of the symbolic ring.
+
+ EXAMPLES::
+@@ -476,7 +476,7 @@ cdef class SymbolicRing(CommutativeRing)
+ return new_Expression_from_GEx(self, exp)
+
+ def wild(self, unsigned int n=0):
+- """
++ r"""
+ Return the n-th wild-card for pattern matching and substitution.
+
+ INPUT:
+@@ -728,7 +728,7 @@ cdef class SymbolicRing(CommutativeRing)
+ return e
+
+ def var(self, name, latex_name=None, n=None, domain=None):
+- """
++ r"""
+ Return a symbolic variable as an element of the symbolic ring.
+
+ INPUT:
+@@ -913,7 +913,7 @@ cdef class SymbolicRing(CommutativeRing)
+ return ccrepr(x._gobj)
+
+ def _latex_element_(self, Expression x):
+- """
++ r"""
+ Returns the standard LaTeX version of the expression *x*.
+
+ EXAMPLES::
+diff -up src/sage/symbolic/series.pyx.orig src/sage/symbolic/series.pyx
+--- src/sage/symbolic/series.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/symbolic/series.pyx 2020-02-27 15:06:54.249929204 -0700
+@@ -1,4 +1,4 @@
+-"""
++r"""
+ Symbolic Series
+
+ Symbolic series are special kinds of symbolic expressions that are
diff --git a/sagemath-extensions.patch b/sagemath-extensions.patch
index 08a18f0..22f1416 100644
--- a/sagemath-extensions.patch
+++ b/sagemath-extensions.patch
@@ -1,5 +1,6 @@
---- src/module_list.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/module_list.py 2020-01-06 20:27:37.840293653 -0700
+diff -up src/module_list.py.orig src/module_list.py
+--- src/module_list.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/module_list.py 2020-02-25 13:38:22.980350735 -0700
@@ -389,16 +389,16 @@ ext_modules = [
Extension('sage.graphs.matchpoly',
sources = ['sage/graphs/matchpoly.pyx']),
@@ -35,7 +36,7 @@
Extension('sage.graphs.spanning_tree',
sources = ['sage/graphs/spanning_tree.pyx']),
-@@ -476,9 +475,9 @@ ext_modules = [
+@@ -479,9 +478,9 @@ ext_modules = [
##
################################
@@ -47,7 +48,7 @@
Extension('*', ['sage/interfaces/*.pyx']),
-@@ -497,21 +496,19 @@ ext_modules = [
+@@ -500,21 +499,19 @@ ext_modules = [
##
################################
@@ -74,7 +75,7 @@
Extension('sage.libs.flint.flint',
sources = ["sage/libs/flint/flint.pyx"],
-@@ -540,13 +537,14 @@ ext_modules = [
+@@ -543,13 +540,14 @@ ext_modules = [
sources = ["sage/libs/homfly.pyx"],
libraries = ["homfly", "gc"]),
@@ -92,7 +93,7 @@
Extension('sage.libs.lcalc.lcalc_Lfunction',
sources = ['sage/libs/lcalc/lcalc_Lfunction.pyx'],
-@@ -563,10 +561,9 @@ ext_modules = [
+@@ -566,10 +564,9 @@ ext_modules = [
Extension('sage.libs.lrcalc.lrcalc',
sources = ["sage/libs/lrcalc/lrcalc.pyx"]),
@@ -105,7 +106,7 @@
Extension('*', ['sage/libs/pari/*.pyx']),
-@@ -812,7 +809,8 @@ ext_modules = [
+@@ -815,7 +812,8 @@ ext_modules = [
include_dirs = cblas_include_dirs),
Extension('sage.matrix.matrix_integer_sparse',
@@ -115,7 +116,7 @@
Extension('sage.matrix.matrix_mod2_dense',
sources = ['sage/matrix/matrix_mod2_dense.pyx'],
-@@ -831,20 +829,21 @@ ext_modules = [
+@@ -834,20 +832,21 @@ ext_modules = [
Extension('sage.matrix.matrix_modn_dense_float',
sources = ['sage/matrix/matrix_modn_dense_float.pyx'],
language="c++",
@@ -140,7 +141,7 @@
Extension('sage.matrix.matrix_mpolynomial_dense',
sources = ['sage/matrix/matrix_mpolynomial_dense.pyx']),
-@@ -874,10 +873,9 @@ ext_modules = [
+@@ -877,10 +876,9 @@ ext_modules = [
Extension('sage.matrix.matrix_window',
sources = ['sage/matrix/matrix_window.pyx']),
@@ -153,7 +154,7 @@
Extension('sage.matrix.misc',
sources = ['sage/matrix/misc.pyx']),
-@@ -1053,26 +1051,25 @@ ext_modules = [
+@@ -1056,26 +1054,25 @@ ext_modules = [
Extension("sage.numerical.backends.interactivelp_backend",
["sage/numerical/backends/interactivelp_backend.pyx"]),
diff --git a/sagemath-includes.patch b/sagemath-includes.patch
index ae7438e..174668a 100644
--- a/sagemath-includes.patch
+++ b/sagemath-includes.patch
@@ -1,5 +1,6 @@
---- src/module_list.py.orig 2020-01-06 20:29:14.108070190 -0700
-+++ src/module_list.py 2020-01-06 20:29:39.724010734 -0700
+diff -up src/module_list.py.orig src/module_list.py
+--- src/module_list.py.orig 2020-02-25 13:53:37.097039897 -0700
++++ src/module_list.py 2020-02-26 14:43:39.912744735 -0700
@@ -44,6 +44,9 @@ zlib_libs = zlib_pc['libraries']
zlib_library_dirs = zlib_pc['library_dirs']
zlib_include_dirs = zlib_pc['include_dirs']
@@ -35,7 +36,7 @@
Extension('*', sources = ['sage/algebras/finite_dimensional_algebras/*.pyx']),
-@@ -559,7 +571,8 @@ ext_modules = [
+@@ -562,7 +574,8 @@ ext_modules = [
[])),
Extension('sage.libs.lrcalc.lrcalc',
@@ -45,7 +46,7 @@
Extension("sage.libs.meataxe",
sources = ['sage/libs/meataxe.pyx'],
-@@ -580,23 +593,28 @@ ext_modules = [
+@@ -583,23 +596,28 @@ ext_modules = [
sources = ['sage/libs/readline.pyx'],
libraries = ['readline']),
@@ -79,7 +80,7 @@
###################################
##
-@@ -604,7 +622,8 @@ ext_modules = [
+@@ -607,7 +625,8 @@ ext_modules = [
##
###################################
@@ -89,7 +90,7 @@
###################################
##
-@@ -776,7 +795,8 @@ ext_modules = [
+@@ -779,7 +798,8 @@ ext_modules = [
Extension("sage.matrix.matrix_complex_ball_dense",
["sage/matrix/matrix_complex_ball_dense.pyx"],
@@ -99,7 +100,7 @@
Extension('sage.matrix.matrix_complex_double_dense',
sources = ['sage/matrix/matrix_complex_double_dense.pyx']),
-@@ -784,6 +804,7 @@ ext_modules = [
+@@ -787,6 +807,7 @@ ext_modules = [
Extension('sage.matrix.matrix_cyclo_dense',
sources = ['sage/matrix/matrix_cyclo_dense.pyx'],
language = "c++",
@@ -107,7 +108,7 @@
libraries=['ntl']),
Extension('sage.matrix.matrix_gap',
-@@ -846,6 +867,7 @@ ext_modules = [
+@@ -849,6 +870,7 @@ ext_modules = [
libraries = ['gomp']),
Extension('sage.matrix.matrix_mpolynomial_dense',
@@ -115,7 +116,7 @@
sources = ['sage/matrix/matrix_mpolynomial_dense.pyx']),
Extension('sage.matrix.matrix_polynomial_dense',
-@@ -1132,7 +1154,8 @@ ext_modules = [
+@@ -1135,7 +1157,8 @@ ext_modules = [
language = 'c++'),
Extension("sage.rings.complex_arb",
@@ -125,7 +126,7 @@
Extension('sage.rings.complex_double',
sources = ['sage/rings/complex_double.pyx'],
-@@ -1208,7 +1231,8 @@ ext_modules = [
+@@ -1211,7 +1234,8 @@ ext_modules = [
sources = ['sage/rings/real_interval_absolute.pyx']),
Extension("sage.rings.real_arb",
@@ -135,7 +136,7 @@
Extension('sage.rings.real_lazy',
sources = ['sage/rings/real_lazy.pyx']),
-@@ -1291,6 +1315,7 @@ ext_modules = [
+@@ -1294,6 +1318,7 @@ ext_modules = [
Extension('sage.rings.number_field.number_field_element_quadratic',
sources = ['sage/rings/number_field/number_field_element_quadratic.pyx'],
@@ -143,7 +144,7 @@
libraries=['ntl'],
language = 'c++'),
-@@ -1430,12 +1455,15 @@ ext_modules = [
+@@ -1433,12 +1458,15 @@ ext_modules = [
sources = ['sage/rings/polynomial/multi_polynomial.pyx']),
Extension('sage.rings.polynomial.multi_polynomial_ideal_libsingular',
@@ -159,7 +160,7 @@
sources = ['sage/rings/polynomial/multi_polynomial_libsingular.pyx']),
Extension('sage.rings.polynomial.multi_polynomial_ring_base',
-@@ -1448,7 +1476,8 @@ ext_modules = [
+@@ -1451,7 +1479,8 @@ ext_modules = [
sources = ['sage/rings/polynomial/polydict.pyx']),
Extension('sage.rings.polynomial.polynomial_complex_arb',
@@ -169,8 +170,9 @@
Extension('sage.rings.polynomial.polynomial_compiled',
sources = ['sage/rings/polynomial/polynomial_compiled.pyx']),
---- src/setup.py.orig 2020-01-06 20:29:10.564078418 -0700
-+++ src/setup.py 2020-01-06 20:29:39.725010732 -0700
+diff -up src/setup.py.orig src/setup.py
+--- src/setup.py.orig 2020-02-26 15:43:14.065012133 -0700
++++ src/setup.py 2020-02-26 15:52:14.558846775 -0700
@@ -85,6 +85,7 @@ keep_going = False
# search for dependencies and add to gcc -I<path>
diff --git a/sagemath-primecount.patch b/sagemath-primecount.patch
deleted file mode 100644
index 29434b8..0000000
--- a/sagemath-primecount.patch
+++ /dev/null
@@ -1,110 +0,0 @@
-diff -up src/sage/interfaces/primecount.pyx.orig src/sage/interfaces/primecount.pyx
---- src/sage/interfaces/primecount.pyx.orig 2019-06-26 14:41:04.000000000 -0600
-+++ src/sage/interfaces/primecount.pyx 2019-09-17 16:13:46.316032782 -0600
-@@ -22,7 +22,7 @@ cdef inline int _do_sig(int64_t n):
- "threshold for sig_on/sig_off"
- return n >> 26
-
--cpdef int64_t prime_pi(int64_t n, method=None) except -1:
-+cpdef int64_t prime_pi(int64_t n) except -1:
- r"""
- Return the number of prime numbers smaller or equal than ``n``.
-
-@@ -30,76 +30,22 @@ cpdef int64_t prime_pi(int64_t n, method
-
- - ``n`` - an integer
-
-- - ``method`` - ``None`` or a string that determines the primecount
-- function to be called
--
-- - ``"deleglise_rivat"``
-- - ``"legendre"``
-- - ``"lehmer"``
-- - ``"lmo"``
-- - ``"meissel"``
-- - ``"primesieve"``
--
- EXAMPLES::
-
- sage: from sage.interfaces.primecount import prime_pi # optional - primecount
-
- sage: prime_pi(1000) == 168 # optional - primecount
- True
-- sage: prime_pi(1000, "deleglise_rivat") == 168 # optional - primecount
-- True
-- sage: prime_pi(1000, "legendre") == 168 # optional - primecount
-- True
-- sage: prime_pi(1000, "lehmer") == 168 # optional - primecount
-- True
-- sage: prime_pi(1000, "lmo") == 168 # optional - primecount
-- True
-- sage: prime_pi(1000, "meissel") == 168 # optional - primecount
-- True
-- sage: prime_pi(1000, "primesieve") == 168 # optional - primecount
-- True
-- sage: prime_pi(1000, "youpi") # optional - primecount
-- Traceback (most recent call last):
-- ...
-- ValueError: unknown method 'youpi'
- """
- cdef int64_t ans
-- if method is None:
-- if _do_sig(n): sig_on()
-- ans = primecount.pi(n)
-- if _do_sig(n): sig_off()
-- elif method == "deleglise_rivat":
-- if _do_sig(n): sig_on()
-- ans = primecount.pi_deleglise_rivat(n)
-- if _do_sig(n): sig_off()
-- elif method == "legendre":
-- if _do_sig(n): sig_on()
-- ans = primecount.pi_legendre(n)
-- if _do_sig(n): sig_off()
-- elif method == "lehmer":
-- if _do_sig(n): sig_on()
-- ans = primecount.pi_lehmer(n)
-- if _do_sig(n): sig_off()
-- elif method == "lmo":
-- if _do_sig(n): sig_on()
-- ans = primecount.pi_lmo(n)
-- if _do_sig(n): sig_off()
-- elif method == "meissel":
-- if _do_sig(n): sig_on()
-- ans = primecount.pi_meissel(n)
-- if _do_sig(n): sig_off()
-- elif method == "primesieve":
-- if _do_sig(n): sig_on()
-- ans = primecount.pi_primesieve(n)
-- if _do_sig(n): sig_off()
-- else:
-- raise ValueError("unknown method {!r}".format(method))
--
-+ if _do_sig(n): sig_on()
-+ ans = primecount.pi(n)
-+ if _do_sig(n): sig_off()
- return ans
-
- cpdef prime_pi_128(n):
- r"""
-- Return the number of prime number smaller than ``n``.
-+ Return the number of prime numbers smaller than ``n``.
-
- EXAMPLES::
-
-diff -up src/sage/libs/primecount.pxd.orig src/sage/libs/primecount.pxd
---- src/sage/libs/primecount.pxd.orig 2019-06-26 14:41:05.000000000 -0600
-+++ src/sage/libs/primecount.pxd 2019-09-17 16:11:06.678851358 -0600
-@@ -9,13 +9,6 @@ cdef extern from "primecount.hpp" namesp
-
- cppstring pi(const cppstring& x)
-
-- int64_t pi_deleglise_rivat(int64_t x)
-- int64_t pi_legendre(int64_t x)
-- int64_t pi_lehmer(int64_t x)
-- int64_t pi_lmo(int64_t x)
-- int64_t pi_meissel(int64_t x)
-- int64_t pi_primesieve(int64_t x)
--
- int64_t nth_prime(int64_t n)
-
- int64_t phi(int64_t x, int64_t a)
diff --git a/sagemath-python3.patch b/sagemath-python3.patch
index b01dda9..36a73fd 100644
--- a/sagemath-python3.patch
+++ b/sagemath-python3.patch
@@ -1,51 +1,6 @@
-diff -up build/pkgs/sagenb/src/sagenb/misc/support.py.orig build/pkgs/sagenb/src/sagenb/misc/support.py
---- build/pkgs/sagenb/src/sagenb/misc/support.py.orig 2019-02-01 06:34:20.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/misc/support.py 2020-01-07 19:57:46.756664911 -0700
-@@ -178,7 +178,7 @@ def completions(s, globs, format=False,
- try:
- if not '.' in s and not '(' in s:
- v = [x for x in globs.keys() if x[:n] == s] + \
-- [x for x in __builtins__.keys() if x[:n] == s]
-+ [x for x in builtins.keys() if x[:n] == s]
- else:
- if not ')' in s:
- i = s.rfind('.')
-diff -up build/pkgs/sagenb/src/sagenb/notebook/docHTMLProcessor.py.orig build/pkgs/sagenb/src/sagenb/notebook/docHTMLProcessor.py
---- build/pkgs/sagenb/src/sagenb/notebook/docHTMLProcessor.py.orig 2019-02-01 05:37:36.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/notebook/docHTMLProcessor.py 2020-01-07 19:57:46.757664910 -0700
-@@ -25,7 +25,7 @@ This module contains three classes:
-
- .. NOTE::
-
-- This extension of htmllib.HTMLParser was partly inspired by Mark
-+ This extension of html.parser.HTMLParser was partly inspired by Mark
- Pilgrim's 'Dive Into Python' examples.
-
- AUTHORS:
-@@ -155,7 +155,7 @@ class genericHTMLProcessor(HTMLParser):
- u'<h1 class="title">Title</h1>\n\n<p>nSome text</p>\n\n\n\n'
-
- """
-- # self.feed() is a HTMLParser method and starts everything
-+ # self.feed() is an HTMLParser method and starts everything
- # off; Most of the functions here are extensions to
- # HTMLParser, and may never actually be visibly called here.
-
-diff -up build/pkgs/sagenb/src/sagenb/notebook/wiki2html.py.orig build/pkgs/sagenb/src/sagenb/notebook/wiki2html.py
---- build/pkgs/sagenb/src/sagenb/notebook/wiki2html.py.orig 2019-02-01 05:37:36.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/notebook/wiki2html.py 2020-01-07 19:57:46.758664910 -0700
-@@ -59,7 +59,7 @@ class Parser:
- 'parent': r'(?:%s)?' % re.escape(PARENT_PREFIX),
- }
- url_rule = r'%(url_guard)s(%(url)s)\:([^\s\<%(punct)s]|([%(punct)s][^\s\<%(punct)s]))+' % {
-- 'url_guard': ur'(^|(?<!\w))',
-+ 'url_guard': r'(^|(?<!\w))',
- 'url': url_pattern,
- 'punct': punct_pattern,
- }
diff -up build/pkgs/sagetex/src/extractsagecode.py.orig build/pkgs/sagetex/src/extractsagecode.py
---- build/pkgs/sagetex/src/extractsagecode.py.orig 2019-06-11 04:58:29.000000000 -0600
-+++ build/pkgs/sagetex/src/extractsagecode.py 2020-01-07 19:57:46.759664909 -0700
+--- build/pkgs/sagetex/src/extractsagecode.py.orig 2019-11-14 04:02:40.000000000 -0700
++++ build/pkgs/sagetex/src/extractsagecode.py 2020-02-25 13:42:46.674646884 -0700
@@ -45,7 +45,7 @@ See the SageTeX documentation for more d
try:
@@ -56,8 +11,8 @@ diff -up build/pkgs/sagetex/src/extractsagecode.py.orig build/pkgs/sagetex/src/e
usage()
sys.exit(2)
diff -up build/pkgs/sagetex/src/makestatic.py.orig build/pkgs/sagetex/src/makestatic.py
---- build/pkgs/sagetex/src/makestatic.py.orig 2019-06-11 04:58:29.000000000 -0600
-+++ build/pkgs/sagetex/src/makestatic.py 2020-01-07 19:57:46.759664909 -0700
+--- build/pkgs/sagetex/src/makestatic.py.orig 2019-11-14 04:02:40.000000000 -0700
++++ build/pkgs/sagetex/src/makestatic.py 2020-02-25 13:42:46.674646884 -0700
@@ -45,7 +45,7 @@ See the SageTeX documentation for more d
try:
@@ -68,8 +23,8 @@ diff -up build/pkgs/sagetex/src/makestatic.py.orig build/pkgs/sagetex/src/makest
usage()
sys.exit(2)
diff -up build/pkgs/sagetex/src/remote-sagetex.py.orig build/pkgs/sagetex/src/remote-sagetex.py
---- build/pkgs/sagetex/src/remote-sagetex.py.orig 2019-06-11 04:58:29.000000000 -0600
-+++ build/pkgs/sagetex/src/remote-sagetex.py 2020-01-07 19:57:46.760664908 -0700
+--- build/pkgs/sagetex/src/remote-sagetex.py.orig 2019-11-14 04:02:40.000000000 -0700
++++ build/pkgs/sagetex/src/remote-sagetex.py 2020-02-25 13:42:46.674646884 -0700
@@ -24,12 +24,11 @@
## You should have received a copy of the GNU General Public License along
## with this program. If not, see <http://www.gnu.org/licenses/>.
@@ -133,8 +88,8 @@ diff -up build/pkgs/sagetex/src/remote-sagetex.py.orig build/pkgs/sagetex/src/re
if not password:
from getpass import getpass
diff -up build/pkgs/sagetex/src/sagetexparse.py.orig build/pkgs/sagetex/src/sagetexparse.py
---- build/pkgs/sagetex/src/sagetexparse.py.orig 2019-06-11 04:58:29.000000000 -0600
-+++ build/pkgs/sagetex/src/sagetexparse.py 2020-01-07 19:57:46.760664908 -0700
+--- build/pkgs/sagetex/src/sagetexparse.py.orig 2019-11-14 04:02:40.000000000 -0700
++++ build/pkgs/sagetex/src/sagetexparse.py 2020-02-25 13:42:46.674646884 -0700
@@ -132,7 +132,7 @@ class SageCodeExtractor():
def plotout(self, s, l, t):
@@ -145,8 +100,8 @@ diff -up build/pkgs/sagetex/src/sagetexparse.py.orig build/pkgs/sagetex/src/sage
self.result += t.code[1:-1] + '\n\n'
diff -up src/sage/combinat/finite_state_machine.py.orig src/sage/combinat/finite_state_machine.py
---- src/sage/combinat/finite_state_machine.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/combinat/finite_state_machine.py 2020-01-07 19:57:46.766664904 -0700
+--- src/sage/combinat/finite_state_machine.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/finite_state_machine.py 2020-02-25 13:42:46.676646848 -0700
@@ -936,7 +936,7 @@ from six.moves import range, zip_longest
from six import itervalues
@@ -156,7 +111,7 @@ diff -up src/sage/combinat/finite_state_machine.py.orig src/sage/combinat/finite
import itertools
from copy import copy, deepcopy
-@@ -14166,7 +14166,7 @@ def is_FSMProcessIterator(PI):
+@@ -14161,7 +14161,7 @@ def is_FSMProcessIterator(PI):
class FSMProcessIterator(SageObject,
@@ -165,21 +120,9 @@ diff -up src/sage/combinat/finite_state_machine.py.orig src/sage/combinat/finite
"""
This class takes an input, feeds it into a finite state machine
(automaton or transducer, in particular), tests whether this was
-diff -up src/sage/combinat/multiset_partition_into_sets_ordered.py.orig src/sage/combinat/multiset_partition_into_sets_ordered.py
---- src/sage/combinat/multiset_partition_into_sets_ordered.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/combinat/multiset_partition_into_sets_ordered.py 2020-01-07 19:57:46.768664902 -0700
-@@ -1952,7 +1952,7 @@ class OrderedMultisetPartitionsIntoSets(
-
- # slice by 'order'
- if "alphabet" in fc:
-- no_alpha = {k: v for (k, v) in iteritems(self.constraints) if k is not "alphabet"}
-+ no_alpha = {k: v for (k, v) in iteritems(self.constraints) if k != "alphabet"}
- return OrderedMultisetPartitionsIntoSets(fc["alphabet"], size, **no_alpha)
-
- # slice by 'size'
diff -up src/sage/combinat/root_system/branching_rules.py.orig src/sage/combinat/root_system/branching_rules.py
---- src/sage/combinat/root_system/branching_rules.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/combinat/root_system/branching_rules.py 2020-01-07 19:57:46.769664902 -0700
+--- src/sage/combinat/root_system/branching_rules.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/combinat/root_system/branching_rules.py 2020-02-25 13:42:46.678646812 -0700
@@ -1750,7 +1750,7 @@ def branching_rule(Rtype, Stype, rule="d
elif rule == "tensor" or rule == "tensor-debug":
if not Stype.is_compound():
@@ -190,9 +133,9 @@ diff -up src/sage/combinat/root_system/branching_rules.py.orig src/sage/combinat
if Rtype[0] == 'A':
nr = Rtype[1]+1
diff -up src/sage/geometry/triangulation/point_configuration.py.orig src/sage/geometry/triangulation/point_configuration.py
---- src/sage/geometry/triangulation/point_configuration.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/geometry/triangulation/point_configuration.py 2020-01-07 19:57:46.770664901 -0700
-@@ -619,7 +619,7 @@ class PointConfiguration(UniqueRepresent
+--- src/sage/geometry/triangulation/point_configuration.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/geometry/triangulation/point_configuration.py 2020-02-26 14:41:58.109624057 -0700
+@@ -619,11 +619,11 @@ class PointConfiguration(UniqueRepresent
['{{0,1,2,4},{1,2,3,4}}']
"""
timeout = 600
@@ -201,9 +144,14 @@ diff -up src/sage/geometry/triangulation/point_configuration.py.orig src/sage/ge
proc.expect(r'Evaluating Commandline Options \.\.\.')
proc.expect(r'\.\.\. done\.')
proc.setecho(0)
+- assert proc.readline().strip() == b''
++ assert proc.readline().strip() == ''
+
+ if verbose:
+ print("#### TOPCOM input ####")
diff -up src/sage/graphs/graph_latex.py.orig src/sage/graphs/graph_latex.py
---- src/sage/graphs/graph_latex.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/graphs/graph_latex.py 2020-01-07 19:59:40.240580166 -0700
+--- src/sage/graphs/graph_latex.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/graph_latex.py 2020-02-25 13:42:46.679646794 -0700
@@ -1156,7 +1156,7 @@ class GraphLatex(SageObject):
#
elif name in color_dicts:
@@ -263,20 +211,20 @@ diff -up src/sage/graphs/graph_latex.py.orig src/sage/graphs/graph_latex.py
for key, p in value.items():
if not((isinstance(p, tuple)) and (len(p) == 2) and (p[0] >= 0) and (p[1] in compass_points)):
diff -up src/sage/interfaces/frobby.py.orig src/sage/interfaces/frobby.py
---- src/sage/interfaces/frobby.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/interfaces/frobby.py 2020-01-07 19:57:46.771664900 -0700
-@@ -77,7 +77,7 @@ class Frobby:
+--- src/sage/interfaces/frobby.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/interfaces/frobby.py 2020-02-26 14:41:07.262562710 -0700
+@@ -79,7 +79,7 @@ class Frobby:
print("Frobby command: ", repr(command))
print("Frobby input:\n", input)
- process = Popen(command, stdin = PIPE, stdout = PIPE, stderr = PIPE)
-+ process = Popen(command, stdin = PIPE, stdout = PIPE, stderr = PIPE, enconding='utf-8')
- output, err = process.communicate(input = input)
-
- if verbose:
++ process = Popen(command, stdin = PIPE, stdout = PIPE, stderr = PIPE, encoding='utf-8')
+ if input:
+ frinput = str_to_bytes(input)
+ else:
diff -up src/sage/interfaces/gfan.py.orig src/sage/interfaces/gfan.py
---- src/sage/interfaces/gfan.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/interfaces/gfan.py 2020-01-07 19:57:46.772664899 -0700
+--- src/sage/interfaces/gfan.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/interfaces/gfan.py 2020-02-25 13:42:46.679646794 -0700
@@ -66,7 +66,7 @@ class Gfan(object):
if six.PY2:
enc_kwargs = {}
@@ -287,8 +235,8 @@ diff -up src/sage/interfaces/gfan.py.orig src/sage/interfaces/gfan.py
gfan_processes = Popen(cmd, stdin=PIPE, stdout=PIPE, stderr=PIPE,
**enc_kwargs)
diff -up src/sage/interfaces/gp.py.orig src/sage/interfaces/gp.py
---- src/sage/interfaces/gp.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/interfaces/gp.py 2020-01-07 19:57:46.773664899 -0700
+--- src/sage/interfaces/gp.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/interfaces/gp.py 2020-02-25 13:42:46.680646776 -0700
@@ -934,17 +934,6 @@ class GpElement(ExpectElement):
"""
return repr(self.type()) == 't_STR'
@@ -308,8 +256,8 @@ diff -up src/sage/interfaces/gp.py.orig src/sage/interfaces/gp.py
"""
Return Python float.
diff -up src/sage/interfaces/latte.py.orig src/sage/interfaces/latte.py
---- src/sage/interfaces/latte.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/interfaces/latte.py 2020-01-07 19:57:46.773664899 -0700
+--- src/sage/interfaces/latte.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/interfaces/latte.py 2020-02-25 13:42:46.680646776 -0700
@@ -152,6 +152,7 @@ def count(arg, ehrhart_polynomial=False,
latte_proc = Popen(args,
stdin=PIPE, stdout=PIPE,
@@ -327,8 +275,8 @@ diff -up src/sage/interfaces/latte.py.orig src/sage/interfaces/latte.py
ans, err = latte_proc.communicate(arg)
diff -up src/sage/interfaces/sagespawn.pyx.orig src/sage/interfaces/sagespawn.pyx
---- src/sage/interfaces/sagespawn.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/interfaces/sagespawn.pyx 2020-01-07 19:57:46.774664898 -0700
+--- src/sage/interfaces/sagespawn.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/interfaces/sagespawn.pyx 2020-02-25 13:42:46.680646776 -0700
@@ -1,6 +1,6 @@
"""
Sage wrapper around pexpect's ``spawn`` class and
@@ -377,8 +325,8 @@ diff -up src/sage/interfaces/sagespawn.pyx.orig src/sage/interfaces/sagespawn.py
pass
self.fileobj.close()
diff -up src/sage/libs/coxeter3/coxeter.pyx.orig src/sage/libs/coxeter3/coxeter.pyx
---- src/sage/libs/coxeter3/coxeter.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/libs/coxeter3/coxeter.pyx 2020-01-07 19:57:46.776664896 -0700
+--- src/sage/libs/coxeter3/coxeter.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/libs/coxeter3/coxeter.pyx 2020-02-25 13:42:46.680646776 -0700
@@ -33,7 +33,7 @@ cdef class String:
EXAMPLES::
@@ -512,9 +460,9 @@ diff -up src/sage/libs/coxeter3/coxeter.pyx.orig src/sage/libs/coxeter3/coxeter.
if rank == 0:
raise NotImplementedError("Coxeter group of type ['A',0] using Coxeter 3 not yet implemented")
diff -up src/sage/misc/parser.pyx.orig src/sage/misc/parser.pyx
---- src/sage/misc/parser.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/misc/parser.pyx 2020-01-07 19:57:46.777664896 -0700
-@@ -96,7 +96,7 @@ def token_to_str(int token):
+--- src/sage/misc/parser.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/misc/parser.pyx 2020-02-25 13:42:46.681646759 -0700
+@@ -95,7 +95,7 @@ def token_to_str(int token):
cdef inline bint is_alphanumeric(char c):
@@ -813,8 +761,8 @@ diff -up src/sage/misc/parser.pyx.orig src/sage/misc/parser.pyx
return self.p_list(tokens)
else:
diff -up src/sage/plot/plot3d/plot3d.py.orig src/sage/plot/plot3d/plot3d.py
---- src/sage/plot/plot3d/plot3d.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/plot/plot3d/plot3d.py 2020-01-07 19:57:46.778664895 -0700
+--- src/sage/plot/plot3d/plot3d.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/plot/plot3d/plot3d.py 2020-02-25 13:42:46.681646759 -0700
@@ -188,7 +188,8 @@ class _Coordinates(object):
sage: arb((x+z,y*z,z), z, (x,y))
Arbitrary Coordinates coordinate transform (z in terms of x, y)
@@ -826,8 +774,8 @@ diff -up src/sage/plot/plot3d/plot3d.py.orig src/sage/plot/plot3d/plot3d.py
raise ValueError('variables were specified incorrectly for this coordinate system; incorrect variables were %s'%list(set(all_vars).symmetric_difference(set(indep_vars+[dep_var]))))
self.dep_var = dep_var
diff -up src/sage/plot/point.py.orig src/sage/plot/point.py
---- src/sage/plot/point.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/plot/point.py 2020-01-07 19:57:46.779664894 -0700
+--- src/sage/plot/point.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/plot/point.py 2020-02-25 13:42:46.681646759 -0700
@@ -29,7 +29,7 @@ TESTS::
from sage.misc.decorators import options, rename_keyword
from sage.plot.colors import to_mpl_color
@@ -847,8 +795,8 @@ diff -up src/sage/plot/point.py.orig src/sage/plot/point.py
try:
diff -up src/sage/repl/display/fancy_repr.py.orig src/sage/repl/display/fancy_repr.py
---- src/sage/repl/display/fancy_repr.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/repl/display/fancy_repr.py 2020-01-07 19:57:46.780664894 -0700
+--- src/sage/repl/display/fancy_repr.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/repl/display/fancy_repr.py 2020-02-25 13:42:46.682646741 -0700
@@ -15,7 +15,7 @@ Representations of objects.
import types
@@ -868,8 +816,8 @@ diff -up src/sage/repl/display/fancy_repr.py.orig src/sage/repl/display/fancy_re
else:
# A user-provided repr. Find newlines and replace them with p.break_()
diff -up src/sage/repl/ipython_kernel/interact.py.orig src/sage/repl/ipython_kernel/interact.py
---- src/sage/repl/ipython_kernel/interact.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/repl/ipython_kernel/interact.py 2020-01-07 19:57:46.781664893 -0700
+--- src/sage/repl/ipython_kernel/interact.py.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/repl/ipython_kernel/interact.py 2020-02-25 13:42:46.682646741 -0700
@@ -35,7 +35,8 @@ EXAMPLES::
from ipywidgets.widgets import SelectionSlider, ValueWidget, ToggleButtons
@@ -881,9 +829,9 @@ diff -up src/sage/repl/ipython_kernel/interact.py.orig src/sage/repl/ipython_ker
from .widgets_sagenb import input_grid
from sage.structure.element import parent
diff -up src/sage/rings/integer.pyx.orig src/sage/rings/integer.pyx
---- src/sage/rings/integer.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/rings/integer.pyx 2020-01-07 19:57:46.785664890 -0700
-@@ -7124,7 +7124,7 @@ cdef int mpz_set_str_python(mpz_ptr z, c
+--- src/sage/rings/integer.pyx.orig 2020-02-27 10:29:19.004788998 -0700
++++ src/sage/rings/integer.pyx 2020-02-27 15:48:31.176289587 -0700
+@@ -7123,7 +7123,7 @@ cdef int mpz_set_str_python(mpz_ptr z, c
while x[0] == c' ': x += 1 # Strip spaces
# Disallow a sign here
@@ -892,22 +840,10 @@ diff -up src/sage/rings/integer.pyx.orig src/sage/rings/integer.pyx
x = "" # Force an error below
assert base >= 2
-diff -up src/sage/rings/multi_power_series_ring_element.py.orig src/sage/rings/multi_power_series_ring_element.py
---- src/sage/rings/multi_power_series_ring_element.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/rings/multi_power_series_ring_element.py 2020-01-07 19:57:46.786664889 -0700
-@@ -1396,7 +1396,7 @@ class MPowerSeries(PowerSeries):
- # at this stage, self is probably a non-zero
- # element of the base ring
- for a in range(len(self._bg_value.list())):
-- if self._bg_value.list()[a] is not 0:
-+ if self._bg_value.list()[a] != 0:
- return a
-
- def is_nilpotent(self):
diff -up src/sage/rings/polynomial/pbori.pyx.orig src/sage/rings/polynomial/pbori.pyx
---- src/sage/rings/polynomial/pbori.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/rings/polynomial/pbori.pyx 2020-01-07 19:57:46.788664888 -0700
-@@ -4765,8 +4765,7 @@ cdef class PolynomialConstruct:
+--- src/sage/rings/polynomial/pbori.pyx.orig 2020-02-27 10:58:59.991311061 -0700
++++ src/sage/rings/polynomial/pbori.pyx 2020-02-27 15:48:31.177289568 -0700
+@@ -4764,8 +4764,7 @@ cdef class PolynomialConstruct:
# So, it is just a conversion. [Simon King]
return (<BooleanPolynomialRing>ring)._element_constructor_(x)
@@ -918,9 +854,9 @@ diff -up src/sage/rings/polynomial/pbori.pyx.orig src/sage/rings/polynomial/pbor
cdef class MonomialConstruct:
diff -up src/sage/rings/real_mpfi.pyx.orig src/sage/rings/real_mpfi.pyx
---- src/sage/rings/real_mpfi.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/rings/real_mpfi.pyx 2020-01-07 19:57:46.790664886 -0700
-@@ -1943,12 +1943,12 @@ cdef class RealIntervalFieldElement(Ring
+--- src/sage/rings/real_mpfi.pyx.orig 2020-02-27 10:14:36.381371499 -0700
++++ src/sage/rings/real_mpfi.pyx 2020-02-27 15:48:31.178289550 -0700
+@@ -1941,12 +1941,12 @@ cdef class RealIntervalFieldElement(Ring
cdef long digits
digits = strlen(lower_s)
@@ -935,7 +871,7 @@ diff -up src/sage/rings/real_mpfi.pyx.orig src/sage/rings/real_mpfi.pyx
digits -= 1
upper_expo -= digits
-@@ -2117,7 +2117,7 @@ cdef class RealIntervalFieldElement(Ring
+@@ -2115,7 +2115,7 @@ cdef class RealIntervalFieldElement(Ring
raise MemoryError("Unable to allocate memory for the mantissa of an interval")
mpz_get_str(tmp_cstr, base, lower_mpz)
digits = strlen(tmp_cstr)
@@ -945,9 +881,9 @@ diff -up src/sage/rings/real_mpfi.pyx.orig src/sage/rings/real_mpfi.pyx
mant_string = bytes_to_str(tmp_cstr+1)
sign_string = bytes_to_str(b'-')
diff -up src/sage/rings/real_mpfr.pyx.orig src/sage/rings/real_mpfr.pyx
---- src/sage/rings/real_mpfr.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/rings/real_mpfr.pyx 2020-01-07 19:57:46.791664885 -0700
-@@ -2039,7 +2039,7 @@ cdef class RealNumber(sage.structure.ele
+--- src/sage/rings/real_mpfr.pyx.orig 2020-02-27 10:16:40.188177426 -0700
++++ src/sage/rings/real_mpfr.pyx 2020-02-27 15:48:31.179289531 -0700
+@@ -2037,7 +2037,7 @@ cdef class RealNumber(sage.structure.ele
if s is NULL:
raise RuntimeError("unable to convert an mpfr number to a string")
# t contains just digits (no sign, decimal point or exponent)
@@ -957,9 +893,9 @@ diff -up src/sage/rings/real_mpfr.pyx.orig src/sage/rings/real_mpfr.pyx
t = char_to_str(s + 1)
else:
diff -up src/sage/structure/sage_object.pyx.orig src/sage/structure/sage_object.pyx
---- src/sage/structure/sage_object.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/structure/sage_object.pyx 2020-01-07 19:57:46.791664885 -0700
-@@ -665,7 +665,7 @@ cdef class SageObject:
+--- src/sage/structure/sage_object.pyx.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/structure/sage_object.pyx 2020-02-25 13:42:56.898464506 -0700
+@@ -671,7 +671,7 @@ cdef class SageObject:
try:
s = self._interface_init_(I)
except Exception:
@@ -969,9 +905,9 @@ diff -up src/sage/structure/sage_object.pyx.orig src/sage/structure/sage_object.
if c:
try:
diff -up src/sage/symbolic/expression.pyx.orig src/sage/symbolic/expression.pyx
---- src/sage/symbolic/expression.pyx.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/symbolic/expression.pyx 2020-01-07 19:57:46.794664883 -0700
-@@ -12916,7 +12916,7 @@ cdef class hold_class:
+--- src/sage/symbolic/expression.pyx.orig 2020-02-27 09:30:14.669819391 -0700
++++ src/sage/symbolic/expression.pyx 2020-02-27 15:48:31.182289476 -0700
+@@ -12945,7 +12945,7 @@ cdef class hold_class:
sage: SR(2)^5
32
"""
@@ -980,7 +916,7 @@ diff -up src/sage/symbolic/expression.pyx.orig src/sage/symbolic/expression.pyx
def __exit__(self, *args):
"""
-@@ -12929,7 +12929,7 @@ cdef class hold_class:
+@@ -12958,7 +12958,7 @@ cdef class hold_class:
sage: SR(2)^5
32
"""
@@ -989,15 +925,3 @@ diff -up src/sage/symbolic/expression.pyx.orig src/sage/symbolic/expression.pyx
def start(self):
"""
-diff -up src/setup.py.orig src/setup.py
---- src/setup.py.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/setup.py 2020-01-07 19:57:46.794664883 -0700
-@@ -232,7 +232,7 @@ class sage_build_cython(Command):
- cdivision=True,
- embedsignature=True,
- fast_getattr=True,
-- language_level="2",
-+ language_level=3,
- preliminary_late_includes_cy28=True,
- profile=self.profile,
- )
diff --git a/sagemath-sagenb-python3.patch b/sagemath-sagenb-python3.patch
deleted file mode 100644
index 8ba9206..0000000
--- a/sagemath-sagenb-python3.patch
+++ /dev/null
@@ -1,351 +0,0 @@
-diff -up build/pkgs/sagenb/src/sagenb/flask_version/base.py.orig build/pkgs/sagenb/src/sagenb/flask_version/base.py
---- build/pkgs/sagenb/src/sagenb/flask_version/base.py.orig 2019-09-05 13:19:45.878376777 -0300
-+++ build/pkgs/sagenb/src/sagenb/flask_version/base.py 2019-09-05 13:27:08.353250002 -0300
-@@ -140,7 +140,7 @@ def localization_js():
- locale=repr(get_locale())
- if _localization_cache.get(locale,None) is None:
- data = render_template(os.path.join('js/localization.js'), N_=N_, nN_=nN_)
-- _localization_cache[locale] = (data, sha1(repr(data)).hexdigest())
-+ _localization_cache[locale] = (data, sha1(repr(data).encode('ascii')).hexdigest())
- data,datahash = _localization_cache[locale]
-
- if request.environ.get('HTTP_IF_NONE_MATCH', None) == datahash:
-@@ -158,7 +158,7 @@ def mathjax_js():
- if _mathjax_js_cache is None:
- from sagenb.misc.misc import mathjax_macros
- data = render_template('js/mathjax_sage.js', theme_mathjax_macros=mathjax_macros)
-- _mathjax_js_cache = (data, sha1(repr(data)).hexdigest())
-+ _mathjax_js_cache = (data, sha1(repr(data).encode('ascii')).hexdigest())
- data,datahash = _mathjax_js_cache
-
- if request.environ.get('HTTP_IF_NONE_MATCH', None) == datahash:
-@@ -173,7 +173,7 @@ def mathjax_js():
- def keyboard_js(browser_os):
- from sagenb.notebook.keyboards import get_keyboard
- data = get_keyboard(browser_os)
-- datahash=sha1(data).hexdigest()
-+ datahash=sha1(str(data).encode('ascii')).hexdigest()
- if request.environ.get('HTTP_IF_NONE_MATCH', None) == datahash:
- response = make_response('',304)
- else:
-@@ -490,7 +490,7 @@ def create_app(path_to_notebook, *args,
- filename = os.path.join(SRC, path)
- if os.path.isfile(filename):
- from cgi import escape
-- src = escape(open(filename).read().decode('utf-8','ignore'))
-+ src = escape(open(filename).read().decode('ascii'))
- if (os.path.splitext(filename)[1] in
- ['.py','.c','.cc','.h','.hh','.pyx','.pxd']):
- return render_template(os.path.join('html', 'source_code.html'),
-diff -up build/pkgs/sagenb/src/sagenb/misc/format.py.orig build/pkgs/sagenb/src/sagenb/misc/format.py
---- build/pkgs/sagenb/src/sagenb/misc/format.py.orig 2019-09-05 13:20:21.507608139 -0300
-+++ build/pkgs/sagenb/src/sagenb/misc/format.py 2019-09-05 13:27:08.353250002 -0300
-@@ -126,7 +126,7 @@ import sys
- sys.ps1 = "%s"
- print("START%s")
- %s
--""" % (prompt, number, displayhook_hack(string).encode('utf-8', 'ignore'))
-+""" % (prompt, number, displayhook_hack(string).encode('ascii'))
- try:
- string = '# -*- coding: utf-8 -*-\n' + relocate_future_imports(string)
- except SyntaxError:
-diff -up build/pkgs/sagenb/src/sagenb/misc/misc.py.orig build/pkgs/sagenb/src/sagenb/misc/misc.py
---- build/pkgs/sagenb/src/sagenb/misc/misc.py.orig 2019-09-05 13:20:31.231671284 -0300
-+++ build/pkgs/sagenb/src/sagenb/misc/misc.py 2019-09-05 13:27:08.354250008 -0300
-@@ -424,7 +424,7 @@ def set_permissive_permissions(filename)
- stat.S_IRUSR | stat.S_IWUSR | stat.S_IXUSR | \
- stat.S_IRGRP | stat.S_IWGRP | stat.S_IXGRP)
-
--def encoded_str(obj, encoding='utf-8'):
-+def encoded_str(obj, encoding='ascii'):
- r"""
- Takes an object and returns an encoded str human-readable representation.
-
-@@ -445,7 +445,7 @@ def encoded_str(obj, encoding='utf-8'):
- return binary_type(obj)
-
-
--def unicode_str(obj, encoding='utf-8'):
-+def unicode_str(obj, encoding='ascii'):
- r"""
- Takes an object and returns a unicode human-readable representation.
-
-diff -up build/pkgs/sagenb/src/sagenb/misc/support.py.orig build/pkgs/sagenb/src/sagenb/misc/support.py
---- build/pkgs/sagenb/src/sagenb/misc/support.py.orig 2019-09-05 13:20:40.258729902 -0300
-+++ build/pkgs/sagenb/src/sagenb/misc/support.py 2019-09-05 13:27:08.356250022 -0300
-@@ -279,7 +279,7 @@ def docstring(obj_name, globs, system='s
- s += newline
- s += sageinspect.sage_getdoc(obj, obj_name)
- s = s.rstrip()
-- return html_markup(s.decode('utf-8'))
-+ return html_markup(s.decode('ascii'))
-
-
- def html_markup(s):
-@@ -433,7 +433,7 @@ def syseval(system, cmd, dir=None):
- if hasattr(system.__class__, 'chdir'):
- system.chdir(dir)
- if isinstance(cmd, text_type):
-- cmd = cmd.encode('utf-8', 'ignore')
-+ cmd = cmd.encode('ascii')
- return system.eval(cmd, sage_globals, locals=sage_globals)
-
- ######################################################################
-diff -up build/pkgs/sagenb/src/sagenb/misc/worksheet2rst.py.orig build/pkgs/sagenb/src/sagenb/misc/worksheet2rst.py
---- build/pkgs/sagenb/src/sagenb/misc/worksheet2rst.py.orig 2019-09-05 13:20:49.848792176 -0300
-+++ build/pkgs/sagenb/src/sagenb/misc/worksheet2rst.py 2019-09-05 13:27:08.356250022 -0300
-@@ -200,5 +200,5 @@ if __name__=='__main__':
- text = sys.stdin.read()
- images_dir = sys.argv[2] if len(sys.argv)>2 else ''
-
-- print(worksheet2rst(text, images_dir).encode('utf-8'))
-+ print(worksheet2rst(text, images_dir).encode('ascii'))
-
-diff -up build/pkgs/sagenb/src/sagenb/notebook/challenge.py.orig build/pkgs/sagenb/src/sagenb/notebook/challenge.py
---- build/pkgs/sagenb/src/sagenb/notebook/challenge.py.orig 2019-09-05 13:20:58.515848457 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/challenge.py 2019-09-05 13:27:08.356250022 -0300
-@@ -529,7 +529,7 @@ class reCAPTCHAChallenge(AbstractChallen
-
- def encode_if_necessary(s):
- if isinstance(s, unicode):
-- return s.encode('utf-8')
-+ return s.encode('ascii')
- return s
-
- params = urlencode({
-diff -up build/pkgs/sagenb/src/sagenb/notebook/css.py.orig build/pkgs/sagenb/src/sagenb/notebook/css.py
---- build/pkgs/sagenb/src/sagenb/notebook/css.py.orig 2019-09-05 13:21:08.792915193 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/css.py 2019-09-05 13:27:08.357250028 -0300
-@@ -58,5 +58,5 @@ def css(color='default'):
- user_css = '\n' + open(user_css_path).read()
-
- data = main_css + user_css
-- _css_cache = (data, sha1(data).hexdigest())
-+ _css_cache = (data, sha1(str(data).encode('ascii')).hexdigest())
- return _css_cache
-diff -up build/pkgs/sagenb/src/sagenb/notebook/js.py.orig build/pkgs/sagenb/src/sagenb/notebook/js.py
---- build/pkgs/sagenb/src/sagenb/notebook/js.py.orig 2019-09-05 13:21:17.511971810 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/js.py 2019-09-05 13:27:08.357250028 -0300
-@@ -84,7 +84,7 @@ def javascript():
- if debug_mode:
- # TODO: maybe we should return a random hash so that the code
- # is reloaded on every refresh
-- return s, sha1(s).hexdigest()
-+ return s, sha1(str(s).encode('ascii')).hexdigest()
-
- # TODO: use minify here, which is more standard (and usually safer
- # and with gzip compression, smaller); But first inquire about the
-@@ -92,7 +92,7 @@ def javascript():
- # Evil" clause in the license. Does that prevent us from
- # distributing it (i.e., it adds an extra condition to the
- # software)? See http://www.crockford.com/javascript/jsmin.py.txt
-- s = JavaScriptCompressor().getPacked(s.encode('utf-8'))
-+ s = JavaScriptCompressor().getPacked(s.encode('ascii'))
- _cache_javascript = (s, sha1(s).hexdigest())
-
- return _cache_javascript
-diff -up build/pkgs/sagenb/src/sagenb/notebook/register.py.orig build/pkgs/sagenb/src/sagenb/notebook/register.py
---- build/pkgs/sagenb/src/sagenb/notebook/register.py.orig 2019-09-05 13:21:26.247028528 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/register.py 2019-09-05 13:27:08.358250034 -0300
-@@ -22,7 +22,7 @@ def build_msg(key, username, addr, port,
- '%(url_prefix)s://%(addr)s:%(port)s/confirm?key=%(key)s\n\n'
- 'You will be taken to a page which will confirm that you have indeed registered.',
- url_prefix=url_prefix, addr=addr, port=port, key=key)
-- return s.encode('utf-8')
-+ return s.encode('ascii')
-
- def build_password_msg(key, username, addr, port, secure):
- url_prefix = "https" if secure else "http"
-@@ -31,7 +31,7 @@ def build_password_msg(key, username, ad
- 'Sign in at %(url_prefix)s://%(addr)s:%(port)s/\n\n'
- 'Make sure to reset your password by going to Settings in the upper right bar.',
- key=key, url_prefix=url_prefix, addr=addr, port=port)
-- return s.encode('utf-8')
-+ return s.encode('ascii')
-
- def make_key():
- from random import randint
-diff -up build/pkgs/sagenb/src/sagenb/notebook/smtpsend.py.orig build/pkgs/sagenb/src/sagenb/notebook/smtpsend.py
---- build/pkgs/sagenb/src/sagenb/notebook/smtpsend.py.orig 2019-09-05 13:21:35.087085930 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/smtpsend.py 2019-09-05 13:27:08.358250034 -0300
-@@ -18,20 +18,15 @@ AUTHOR:
-
- Bobby Moretti
- """
--from twisted.mail import smtp, relaymanager # problematic with python 3
--from email.mime.base import MIMEBase
--from email.mime.multipart import MIMEMultipart
--import sys
--
-+from twisted.mail.smtp import sendmail
-+from twisted.internet.task import react
-+from email.mime.text import MIMEText
-
- def buildMessage(fromaddr, toaddr, subject, body):
-- message = MIMEMultipart()
-+ message = MIMEText(body)
- message['From'] = fromaddr
- message['To'] = toaddr
- message['Subject'] = subject
-- textPart = MIMEBase('text', 'plain')
-- textPart.set_payload(body)
-- message.attach(textPart)
- return message
-
- def sendComplete(result):
-@@ -42,16 +37,10 @@ def handleError(error):
-
- def send_mail(fromaddr, toaddr, subject, body, on_success=sendComplete, on_failure=handleError):
- try:
-- recpt_domain = toaddr.split('@')[1].encode("ascii")
-- except (ValueError, IndexError, UnicodeDecodeError):
-- raise ValueError("mal-formed destination address")
-- message = buildMessage(fromaddr, toaddr, subject, body)
-- messageData = message.as_string(unixfrom=False)
--
-- def on_found_record(mx_rec):
-- smtp_server = str(mx_rec.name)
-- sending = smtp.sendmail(smtp_server, fromaddr, [toaddr], messageData)
-- sending.addCallback(on_success).addErrback(on_failure)
--
-- relaymanager.MXCalculator().getMX(recpt_domain).addCallback(on_found_record)
-+ d = sendmail("localhost", fromaddr, toaddr, message)
-+ d.addBoth(print)
-+ except:
-+ handleError(sys.exc_info()[0])
-+ return
-+ sendComplete()
-
-diff -up build/pkgs/sagenb/src/sagenb/notebook/user_manager.py.orig build/pkgs/sagenb/src/sagenb/notebook/user_manager.py
---- build/pkgs/sagenb/src/sagenb/notebook/user_manager.py.orig 2019-09-05 13:21:45.143151229 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/user_manager.py 2019-09-05 13:27:08.360250047 -0300
-@@ -461,7 +461,7 @@ class SimpleUserManager(UserManager):
- if encrypt:
- salt = user.generate_salt()
- new_password = 'sha256${0}${1}'.format(salt,
-- hashlib.sha256(salt + new_password).hexdigest())
-+ hashlib.sha256(str(salt + new_password).encode('ascii')).hexdigest())
- self._passwords[username] = new_password
- # need to make sure password in the user object is synced
- # for compatibility only the user object data is stored in the 'users.pickle'
-diff -up build/pkgs/sagenb/src/sagenb/notebook/user.py.orig build/pkgs/sagenb/src/sagenb/notebook/user.py
---- build/pkgs/sagenb/src/sagenb/notebook/user.py.orig 2019-09-05 13:21:54.855214298 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/user.py 2019-09-05 13:27:08.360250047 -0300
-@@ -185,7 +185,7 @@ class User(object):
- if encrypt:
- salt = generate_salt()
- self._password = 'sha256${0}${1}'.format(salt,
-- hashlib.sha256(salt + password).hexdigest())
-+ hashlib.sha256(str(salt + password).encode('ascii')).hexdigest())
- else:
- self._password = password
- self._temporary_password = ''
-diff -up build/pkgs/sagenb/src/sagenb/notebook/worksheet.py.orig build/pkgs/sagenb/src/sagenb/notebook/worksheet.py
---- build/pkgs/sagenb/src/sagenb/notebook/worksheet.py.orig 2019-09-05 13:26:14.467900092 -0300
-+++ build/pkgs/sagenb/src/sagenb/notebook/worksheet.py 2019-09-05 13:27:08.361250054 -0300
-@@ -313,7 +313,7 @@ class Worksheet(object):
-
- d = {#############
- # basic identification
-- 'name': unicode(self.name()),
-+ 'name': str(self.name().encode('ascii')),
- 'id_number': int(self.id_number()),
-
- #############
-@@ -2157,9 +2157,9 @@ class Worksheet(object):
- filename = self.worksheet_html_filename()
-
- if os.path.exists(filename):
-- contents = open(filename).read().decode('utf-8', 'ignore')
-+ contents = open(filename).read().decode('ascii')
- else:
-- contents = u' '
-+ contents = ' '
-
- try:
- r = [unicode(x.lower()) for x in [self.owner(), self.publisher(), self.name(), contents]]
-@@ -2190,8 +2190,8 @@ class Worksheet(object):
- if E is None:
- E = self.edit_text()
- worksheet_html = self.worksheet_html_filename()
-- open(filename, 'w').write(bz2.compress(E.encode('utf-8', 'ignore')))
-- open(worksheet_html, 'w').write(self.body().encode('utf-8', 'ignore'))
-+ open(filename, 'w').write(bz2.compress(E.encode('ascii')))
-+ open(worksheet_html, 'w').write(self.body().encode('ascii'))
- self.limit_snapshots()
- try:
- X = self.__saved_by_info
-@@ -3930,7 +3930,7 @@ except (KeyError, IOError):
- """
- # The extra newline below is necessary, since otherwise source
- # code introspection doesn't include the last line.
-- return 'open("%s","w").write("# -*- coding: utf-8 -*-\\n" + _support_.preparse_worksheet_cell(base64.b64decode("%s"),globals())+"\\n"); execfile(os.path.abspath("%s"))'%(CODE_PY, base64.b64encode(s.encode('utf-8', 'ignore')), CODE_PY)
-+ return 'open("%s","w").write("# -*- coding: utf-8 -*-\\n" + _support_.preparse_worksheet_cell(base64.b64decode("%s"),globals())+"\\n"); execfile(os.path.abspath("%s"))'%(CODE_PY, base64.b64encode(s.encode('ascii')), CODE_PY)
-
- ##########################################################
- # Loading and attaching files
-@@ -4114,7 +4114,7 @@ except (KeyError, IOError):
- os.makedirs(code)
- spyx = os.path.abspath(os.path.join(code, 'sage%s.spyx'%id))
- if not (os.path.exists(spyx) and open(spyx).read() == cmd):
-- open(spyx,'w').write(cmd.encode('utf-8', 'ignore'))
-+ open(spyx,'w').write(cmd.encode('ascii'))
- return '_support_.cython_import_all("%s", globals())'%spyx
-
- def check_for_system_switching(self, input, cell):
-diff -up build/pkgs/sagenb/src/sagenb/storage/filesystem_storage.py.orig build/pkgs/sagenb/src/sagenb/storage/filesystem_storage.py
---- build/pkgs/sagenb/src/sagenb/storage/filesystem_storage.py.orig 2019-09-05 13:22:17.198359375 -0300
-+++ build/pkgs/sagenb/src/sagenb/storage/filesystem_storage.py 2019-09-05 13:27:08.361250054 -0300
-@@ -106,7 +106,7 @@ class FilesystemDatastore(Datastore):
-
- def _deep_user_path(self, username):
- from hashlib import md5
-- h = md5(username).hexdigest()
-+ h = md5(str(username).encode('ascii')).hexdigest()
- base = ['__store__', h[:1], h[:2], h[:3], h[:4]]
- path = os.path.join(*base)
- self._makepath(self._abspath(os.path.join(self._home_path, path)))
-@@ -397,7 +397,7 @@ class FilesystemDatastore(Datastore):
- # todo -- add check if changed
- filename = self._worksheet_html_filename(username, id_number)
- with atomic_write(self._abspath(filename)) as f:
-- f.write(worksheet.body().encode('utf-8', 'ignore'))
-+ f.write(str(worksheet.body()))
-
- def create_worksheet(self, username, id_number):
- """
-@@ -548,7 +548,7 @@ class FilesystemDatastore(Datastore):
-
- worksheet_txt = members[0].name
- W = self.load_worksheet(username, id_number)
-- W.edit_save_old_format(T.extractfile(worksheet_txt).read().decode('utf-8', 'ignore'))
-+ W.edit_save_old_format(T.extractfile(worksheet_txt).read().decode('ascii'))
- # '/' is right, since old worksheets always unix
- dir = worksheet_txt.split('/')[0]
-
-diff -up build/pkgs/sagenb/src/sagenb/testing/selenium/selenium.py.orig build/pkgs/sagenb/src/sagenb/testing/selenium/selenium.py
---- build/pkgs/sagenb/src/sagenb/testing/selenium/selenium.py.orig 2019-09-05 13:22:27.220424454 -0300
-+++ build/pkgs/sagenb/src/sagenb/testing/selenium/selenium.py 2019-09-05 13:27:08.361250054 -0300
-@@ -199,9 +199,9 @@ class selenium:
-
- def do_command(self, verb, args):
- conn = http.client.HTTPConnection(self.host, self.port)
-- body = u'cmd=' + urllib.quote_plus(unicode(verb).encode('utf-8'))
-+ body = u'cmd=' + urllib.quote_plus(unicode(verb).encode('ascii'))
- for i in range(len(args)):
-- body += '&' + unicode(i+1) + '=' + urllib.quote_plus(unicode(args[i]).encode('utf-8'))
-+ body += '&' + unicode(i+1) + '=' + urllib.quote_plus(unicode(args[i]).encode('ascii'))
- if (None != self.sessionId):
- body += "&sessionId=" + unicode(self.sessionId)
- headers = {"Content-Type": "application/x-www-form-urlencoded; charset=utf-8"}
-diff -up build/pkgs/sagenb/src/sagenb/data/sage/html/worksheet_listing.html.orig ./build/pkgs/sagenb/src/sagenb/data/sage/html/worksheet_listing.html
---- build/pkgs/sagenb/src/sagenb/data/sage/html/worksheet_listing.html.orig 2019-09-05 15:39:56.829175774 -0300
-+++ build/pkgs/sagenb/src/sagenb/data/sage/html/worksheet_listing.html 2019-09-05 15:40:26.822369920 -0300
-@@ -45,6 +45,7 @@ INPUT:
- <h1>{{ gettext('Account is read only. You may download or delete worksheets or data.') }}</h1>
- {% endif %}
- <h3><a href="https://trac.sagemath.org/ticket/25837">{{ gettext('This notebook is deprecated. Click here for details.') }}</a></h3>
-+<h5>The sagemath rpm package was built with python3, but the sagemath notebook is discontinued and has not been ported to python3.<br>Only minimal functionality to browse documentation is available.<br>Please run the shell command:<br><code>$ sage -n jupyter</code><br>to use the jupyter notebook.</h5>
- <div id="user-main-controls" class="user-controls">
- {% if pub is not defined or not pub %}
- <a href="/new_worksheet" target="_blank">{{ gettext('New Worksheet') }}</a>
diff --git a/sagemath-sagenb.patch b/sagemath-sagenb.patch
deleted file mode 100644
index 24d25c1..0000000
--- a/sagemath-sagenb.patch
+++ /dev/null
@@ -1,88 +0,0 @@
-diff -up build/pkgs/sagenb/src/sagenb/flask_version/base.py.orig build/pkgs/sagenb/src/sagenb/flask_version/base.py
---- build/pkgs/sagenb/src/sagenb/flask_version/base.py.orig 2018-11-05 08:45:39.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/flask_version/base.py 2019-01-04 10:28:38.099158223 -0700
-@@ -7,8 +7,6 @@ from functools import partial
- from flask import Flask, Blueprint, url_for, request, session, redirect, g, make_response, current_app, render_template
- from .decorators import login_required, guest_or_login_required, with_lock
- from .decorators import global_lock
--# Make flask use the old session foo from <=flask-0.9
--from flask_oldsessions import OldSecureCookieSessionInterface
-
- from flask_autoindex import AutoIndex
- from sage.env import SAGE_SRC, SAGE_DOC
-@@ -28,7 +26,6 @@ class SageNBFlask(Flask):
- def __init__(self, *args, **kwds):
- self.startup_token = kwds.pop('startup_token', None)
- Flask.__init__(self, *args, **kwds)
-- self.session_interface = OldSecureCookieSessionInterface()
-
- self.config['SESSION_COOKIE_HTTPONLY'] = False
-
-@@ -39,13 +36,13 @@ class SageNBFlask(Flask):
- self.add_static_path('/javascript', DATA)
- self.add_static_path('/static', DATA)
- self.add_static_path('/java', DATA)
-- self.add_static_path('/java/jmol', os.path.join(os.environ["SAGE_SHARE"],"jmol"))
-- self.add_static_path('/jsmol', os.path.join(os.environ["SAGE_SHARE"],"jsmol"))
-- self.add_static_path('/jsmol/js', os.path.join(os.environ["SAGE_SHARE"],"jsmol","js"))
-- self.add_static_path('/j2s', os.path.join(os.environ["SAGE_SHARE"],"jsmol","j2s"))
-- self.add_static_path('/jsmol/j2s', os.path.join(os.environ["SAGE_SHARE"],"jsmol","j2s"))
-- self.add_static_path('/j2s/core', os.path.join(os.environ["SAGE_SHARE"],"jsmol","j2s","core"))
-- self.add_static_path('/threejs', os.path.join(os.environ["SAGE_SHARE"],"threejs"))
-+ self.add_static_path('/java/jmol', os.path.join(os.environ["SAGE_ROOT"],"share","jmol"))
-+ self.add_static_path('/jsmol', os.path.join(os.environ["SAGE_ROOT"],"share","jsmol"))
-+ self.add_static_path('/jsmol/js', os.path.join(os.environ["SAGE_ROOT"],"share","jsmol","js"))
-+ self.add_static_path('/j2s', os.path.join(os.environ["SAGE_ROOT"],"jsmol","j2s"))
-+ self.add_static_path('/jsmol/j2s', os.path.join(os.environ["SAGE_ROOT"],"share","jsmol","j2s"))
-+ self.add_static_path('/j2s/core', os.path.join(os.environ["SAGE_ROOT"],"share","jsmol","j2s","core"))
-+ self.add_static_path('/threejs', os.path.join(os.environ["SAGE_ROOT"],"share","threejs"))
- import mimetypes
- mimetypes.add_type('text/plain','.jmol')
-
-diff -up build/pkgs/sagenb/src/sagenb/misc/misc.py.orig build/pkgs/sagenb/src/sagenb/misc/misc.py
---- build/pkgs/sagenb/src/sagenb/misc/misc.py.orig 2018-11-05 08:45:39.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/misc/misc.py 2019-01-04 10:28:38.099158223 -0700
-@@ -196,7 +196,8 @@ def pad_zeros(s, size=3):
-
- SAGENB_ROOT = os.path.split(resource_filename(__name__, ''))[0]
-
--DATA = os.path.join(SAGENB_ROOT, 'data')
-+import sage.env
-+DATA = os.path.join(sage.env.SAGE_SRC, 'sagenb', 'data')
-
- if 'DOT_SAGENB' in os.environ:
- DOT_SAGENB = os.environ['DOT_SAGENB']
-diff -up build/pkgs/sagenb/src/sagenb/notebook/cell.py.orig build/pkgs/sagenb/src/sagenb/notebook/cell.py
---- build/pkgs/sagenb/src/sagenb/notebook/cell.py.orig 2018-11-05 08:45:39.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/notebook/cell.py 2019-01-04 10:28:38.100158204 -0700
-@@ -2387,8 +2387,8 @@ class Cell(Cell_generic):
- with open(jmol_name, 'r') as f:
- jmol_script = f.read()
- jmol_script = jmol_script.replace(
-- 'defaultdirectory "',
-- 'defaultdirectory "{0}/'.format(self.url_to_worksheet()))
-+ 'defaultdirectory "',
-+ 'defaultdirectory "/home/' + self.worksheet_filename() + '/')
- with open(jmol_name, 'w') as f:
- f.write(jmol_script)
-
-diff -up build/pkgs/sagenb/src/sagenb/notebook/run_notebook.py.orig build/pkgs/sagenb/src/sagenb/notebook/run_notebook.py
---- build/pkgs/sagenb/src/sagenb/notebook/run_notebook.py.orig 2018-11-05 08:45:39.000000000 -0700
-+++ build/pkgs/sagenb/src/sagenb/notebook/run_notebook.py 2019-01-04 10:28:38.101158185 -0700
-@@ -53,12 +53,11 @@ sagenb.notebook.misc.DIR = %(cwd)r #We s
- # Flask #
- #########
- import os, sys, random
--import sagenb.flask_version.base as flask_base
--opts={}
-+sagenb_dir = os.path.join(os.environ['SAGE_ROOT'], 'src', 'sagenb')
-+sys.path.append(sagenb_dir)
-+import flask_version.base as flask_base
- startup_token = '{0:x}'.format(random.randint(0, 2**128))
--if %(automatic_login)s:
-- opts['startup_token'] = startup_token
--flask_app = flask_base.create_app(%(notebook_opts)s, **opts)
-+flask_app = flask_base.create_app(%(notebook_opts)s, startup_token=startup_token)
-
- def save_notebook(notebook):
- print("Quitting all running worksheets...")
diff --git a/sagemath-scripts.patch b/sagemath-scripts.patch
index 6b6e447..01cef9b 100644
--- a/sagemath-scripts.patch
+++ b/sagemath-scripts.patch
@@ -1,6 +1,6 @@
diff -up src/bin/sage.orig src/bin/sage
---- src/bin/sage.orig 2019-10-03 14:38:40.429507574 -0300
-+++ src/bin/sage 2019-10-03 14:47:00.852631198 -0300
+--- src/bin/sage.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/bin/sage 2020-02-25 13:37:42.510072662 -0700
@@ -26,13 +26,10 @@ usage() {
echo " file.[sage|py|spyx] -- run given .sage, .py or .spyx file"
echo " -advanced -- list all command line options"
@@ -585,7 +585,7 @@ diff -up src/bin/sage.orig src/bin/sage
- # tends to ask interactive questions if something goes wrong. These
- # cause the build to hang. If stdin is /dev/null, TeX just aborts.
- shift
-- exec sage-python23 -m sage_setup.docbuild "$@" </dev/null
+- exec sage-python -m sage_setup.docbuild "$@" </dev/null
-fi
-
if [ "$1" = '-gdb' -o "$1" = "--gdb" ]; then
@@ -605,8 +605,8 @@ diff -up src/bin/sage.orig src/bin/sage
exec sage-startuptime.py "$@"
fi
diff -up src/bin/sage-valgrind.orig src/bin/sage-valgrind
---- src/bin/sage-valgrind.orig 2019-10-03 14:47:13.247708565 -0300
-+++ src/bin/sage-valgrind 2019-10-03 14:47:46.404915531 -0300
+--- src/bin/sage-valgrind.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/bin/sage-valgrind 2020-02-25 13:36:02.973848216 -0700
@@ -4,17 +4,7 @@ if [ -z $SAGE_EXTCODE ]; then
SAGE_EXTCODE=`${0/-valgrind} -c "from sage.env import SAGE_EXTCODE; print(SAGE_EXTCODE)"`
fi
diff --git a/sagemath-tdlib.patch b/sagemath-tdlib.patch
index aafe061..0612f71 100644
--- a/sagemath-tdlib.patch
+++ b/sagemath-tdlib.patch
@@ -1,5 +1,6 @@
---- src/sage/graphs/graph_decompositions/tdlib/sage_tdlib.cpp.orig 2019-09-29 17:03:11.000000000 -0600
-+++ src/sage/graphs/graph_decompositions/tdlib/sage_tdlib.cpp 2020-01-06 10:58:12.087355771 -0700
+diff -up src/sage/graphs/graph_decompositions/tdlib/sage_tdlib.cpp.orig src/sage/graphs/graph_decompositions/tdlib/sage_tdlib.cpp
+--- src/sage/graphs/graph_decompositions/tdlib/sage_tdlib.cpp.orig 2020-01-01 04:03:10.000000000 -0700
++++ src/sage/graphs/graph_decompositions/tdlib/sage_tdlib.cpp 2020-02-25 13:59:23.612853911 -0700
@@ -2,8 +2,8 @@
#include <map>
diff --git a/sagemath.spec b/sagemath.spec
index 5571df8..d456da1 100644
--- a/sagemath.spec
+++ b/sagemath.spec
@@ -18,9 +18,6 @@
%bcond_with docs
%endif
-# not functional due to missing jar dependencies
-%bcond_with sage3d
-
# use a workaround to match upstream sagemath patched sphinx
%bcond_without sphinx_hack
@@ -40,7 +37,7 @@
%global combinatorial_designs_pkg combinatorial_designs-20140630
%global conway_polynomials_pkg conway_polynomials-0.5
-%global cremona_ver 2016-10-17
+%global cremona_ver 2019-10-29
%global elliptic_curves_pkg elliptic_curves-0.8.1
%global flintqs_pkg flintqs-1.0
%global graphs_pkg graphs-20161026
@@ -59,8 +56,7 @@
%endif
%global polytopes_db_pkg polytopes_db-20170220
%global rubiks_pkg rubiks-20070912
-%global sagenb_pkg sagenb-1.1.2
-%global sagetex_pkg sagetex-3.3
+%global sagetex_pkg sagetex-3.4
%global Sphinx_pkg Sphinx-1.8.5
%global singular_pkg singular-4.1.1p2
%if %{with bundled_thebe}
@@ -68,7 +64,7 @@
%global thebe_pkg thebe-%{thebe_ver}
%endif
%if %{with bundled_threejs}
-%global threejs_ver r105
+%global threejs_ver r110
%global threejs_pkg threejs-%{threejs_ver}
%endif
%if %{with bundled_widgetsnbextension}
@@ -77,7 +73,7 @@
%endif
# Spkg equivalents of required rpms; we pretend they are installed as spkgs.
-%global SAGE_REQUIRED_PKGS 4ti2-1.6.9 bliss-0.73 cbc-2.10.3 CoCoALib-0.99601 coxeter3-1.1 cryptominisat-5.6.8 database_cremona_ellcurve-%{cremona_ver} gap_packages-4.10.2 gmp-6.1.2 libsirocco-2.0 lrslib-070 mcqd-1.0 meataxe-1.0 primecount-5.1 qepcad-B.1.72 saclib-2.2.7 surf-1.0.6-gcc6 tdlib-0.9.0
+%global SAGE_REQUIRED_PKGS 4ti2-1.6.9 bliss-0.73 cbc-2.10.4 CoCoALib-0.99650 coxeter3-3.1 cryptominisat-5.6.8 database_cremona_ellcurve-%{cremona_ver} gap_packages-4.10.2 gmp-6.1.2 libsirocco-2.0.2 lrslib-070 mcqd-1.0 meataxe-1.0 primecount-5.3 qepcad-B.1.72 saclib-2.2.7 surf-1.0.6-gcc6 tdlib-0.9.0
%ifarch %{ix86} x86_64
%global SAGE_REQUIRED_PKGS %{SAGE_REQUIRED_PKGS} fes-0.2
@@ -94,8 +90,8 @@
Name: sagemath
Summary: A free open-source mathematics software system
-Version: 8.9
-Release: 3%{?dist}
+Version: 9.0
+Release: 1%{?dist}
# The file ${SAGE_ROOT}/COPYING.txt is the upstream license breakdown file
# Additionally, every $files section has a comment with the license name
# before files with that license
@@ -107,8 +103,8 @@ Source2: gprc.expect
# Follow maxima's ExclusiveArch
ExclusiveArch: aarch64 %{arm} %{ix86} x86_64 ppc sparcv9
-# Fix ecm interact() command
-Patch0: %{name}-ecm.patch
+# Fix stray escapes in python strings
+Patch0: %{name}-escape.patch
# Fix a "random" bit chooser that always chooses 0
Patch1: %{name}-random.patch
@@ -122,7 +118,7 @@ Patch3: %{name}-extensions.patch
# helper to:
# o respect a DESTDIR environment variable
-# o avoid double '//' in pathnames, what can confused debugedit & co
+# o avoid double '//' in pathnames, which can confuse debugedit & co
# o minor change to help in incremental builds by avoiding rebuilding
# files
# o do not assume there is an installed sagemath
@@ -131,92 +127,83 @@ Patch4: %{name}-rpmbuild.patch
# build documentation in buildroot environment
Patch5: %{name}-sagedoc.patch
-# sage notebook rpm and system environment adjustments
-Patch6: %{name}-sagenb.patch
-
# do not attempt to create state files in system directories
-Patch7: %{name}-readonly.patch
+Patch6: %{name}-readonly.patch
# work with all maxima-runtime lisp backend packages
-Patch8: %{name}-maxima.patch
+Patch7: %{name}-maxima.patch
# execute 4ti2 programs in $PATH not in $SAGE_ROOT/local/bin
-Patch9: %{name}-4ti2.patch
+Patch8: %{name}-4ti2.patch
# use jmol itself to export preview images
# FIXME besides not using X and told so, fails if DISPLAY is not set
-Patch10: %{name}-jmol.patch
+Patch9: %{name}-jmol.patch
# tell the user how to install the large Cremona database
# add a missing commit() that causes large database construction to fail
-Patch11: %{name}-cremona.patch
+Patch10: %{name}-cremona.patch
# adapt to python 3 and cython running in python 3 mode
-Patch12: %{name}-python3.patch
+Patch11: %{name}-python3.patch
# correct path to the nauty geng program
-Patch13: %{name}-nauty.patch
+Patch12: %{name}-nauty.patch
# remove the buildroot path from Cython output
-Patch14: %{name}-buildroot.patch
+Patch13: %{name}-buildroot.patch
# update c++ standard to fix FTBFS
-Patch15: %{name}-lcalc.patch
+Patch14: %{name}-lcalc.patch
# avoid assertion in coin backend
-Patch16: %{name}-cbc.patch
+Patch15: %{name}-cbc.patch
# Use system gap directories
-Patch17: %{name}-libgap.patch
+Patch16: %{name}-libgap.patch
# Build fes
-Patch18: %{name}-fes-build.patch
+Patch17: %{name}-fes-build.patch
# Disable fes
-Patch19: %{name}-fes.patch
+Patch18: %{name}-fes.patch
# Side effect of using distro packages
# https://bugzilla.redhat.com/show_bug.cgi?id=974769
-Patch20: %{name}-sympy.patch
+Patch19: %{name}-sympy.patch
# Correct unable to start QEPCAD within sage
# https://bugzilla.redhat.com/show_bug.cgi?id=1243590
-Patch21: %{name}-qepcad.patch
+Patch20: %{name}-qepcad.patch
# Correct path to arb headers
-Patch22: %{name}-arb.patch
+Patch21: %{name}-arb.patch
# Add missing include paths
-Patch23: %{name}-includes.patch
+Patch22: %{name}-includes.patch
# Use openblas
-Patch24: %{name}-openblas.patch
+Patch23: %{name}-openblas.patch
# Fix paths to latte-integrale binaries
-Patch25: %{name}-latte.patch
+Patch24: %{name}-latte.patch
# Upstream fixes for random SIGFPEs due to ecl messing with the fp state
-Patch26: %{name}-sigfpe.patch
+Patch25: %{name}-sigfpe.patch
# Add some missing #includes and types in the rubiks code
-Patch27: %{name}-rubiks.patch
+Patch26: %{name}-rubiks.patch
# Fix an indentation error in sagetex
-Patch28: %{name}-sagetex.patch
+Patch27: %{name}-sagetex.patch
# Fix some path settings in the sage environment
-Patch29: %{name}-env.patch
-
-# Make notebook minimally function until upstream finally removes it
-Patch30: %{name}-sagenb-python3.patch
-
-# Adapt to primecount 5.x
-Patch31: %{name}-primecount.patch
+Patch28: %{name}-env.patch
# Adapt to recent tdlib 0.9
-Patch32: %{name}-tdlib.patch
+Patch29: %{name}-tdlib.patch
# Use local objects.inv for intersphinx since no network on koji builders
-Patch33: %{name}-intersphinx.patch
+Patch30: %{name}-intersphinx.patch
BuildRequires: 4ti2
BuildRequires: arb-devel
@@ -275,7 +262,7 @@ BuildRequires: iml-devel
BuildRequires: jmol
BuildRequires: jsmath-fonts
# To have a proper link
-#BuildRequires: jsmol
+BuildRequires: jsmol
BuildRequires: L-function-devel
BuildRequires: lapack-devel
BuildRequires: latte-integrale
@@ -319,10 +306,6 @@ BuildRequires: python3dist(brial)
BuildRequires: python3dist(cvxopt)
BuildRequires: python3dist(cython)
BuildRequires: python3dist(docutils)
-BuildRequires: python3dist(flask-autoindex)
-BuildRequires: python3dist(flask-babel)
-BuildRequires: python3dist(flask-openid)
-BuildRequires: python3dist(flask-silk)
BuildRequires: python3dist(fpylll)
BuildRequires: python3dist(future)
BuildRequires: python3dist(gmpy2)
@@ -340,7 +323,6 @@ BuildRequires: python3dist(networkx)
BuildRequires: python3dist(notebook)
%if %{with bundled_ipython}
BuildRequires: python3dist(path.py)
-BuildRequires: python3dist(pathlib2)
%endif
%if %{without bundled_pexpect}
BuildRequires: python3dist(pexpect)
@@ -359,7 +341,6 @@ BuildRequires: python3dist(pyzmq)
BuildRequires: python3dist(rpy2)
BuildRequires: python3dist(scipy)
BuildRequires: python3dist(scons)
-BuildRequires: python3dist(send2trash)
BuildRequires: python3dist(setuptools)
%if %{with bundled_ipython}
BuildRequires: python3dist(simplegeneric)
@@ -368,7 +349,6 @@ BuildRequires: python3dist(six)
BuildRequires: python3dist(speaklater)
BuildRequires: python3dist(sphinx)
BuildRequires: python3dist(sympy)
-BuildRequires: python3dist(twisted)
BuildRequires: python3dist(zodb3)
BuildRequires: qepcad-B
BuildRequires: R
@@ -378,14 +358,14 @@ BuildRequires: rw-devel
BuildRequires: sharedmeataxe-devel
BuildRequires: Singular-devel
BuildRequires: sirocco-devel
-BuildRequires: stix-math-fonts
+BuildRequires: stix-fonts
+BuildRequires: suitesparse-devel
BuildRequires: symmetrica-devel
BuildRequires: sympow
BuildRequires: tachyon
BuildRequires: texlive
BuildRequires: tex(anyfontsize.sty)
BuildRequires: tex(makecmds.sty)
-BuildRequires: vecmath
# For _jsdir macro
BuildRequires: web-assets-devel
BuildRequires: xorg-x11-fonts-Type1
@@ -394,14 +374,14 @@ BuildRequires: zlib-devel
BuildRequires: zn_poly-devel
Requires: hicolor-icon-theme
-Requires: %{name}-core
-Requires: %{name}-data
+Requires: %{name}-core = %{version}-%{release}
+Requires: %{name}-data = %{version}-%{release}
%if %{with docs}
-Requires: %{name}-doc-en
+Requires: %{name}-doc-en = %{version}-%{release}
%endif
-Requires: %{name}-notebook
-Requires: %{name}-rubiks
-Requires: %{name}-sagetex
+Requires: %{name}-jupyter = %{version}-%{release}
+Requires: %{name}-rubiks = %{version}-%{release}
+Requires: %{name}-sagetex = %{version}-%{release}
%if %{with bundled_thebe}
Provides: bundled(thebe) = %{thebe_ver}
@@ -479,7 +459,6 @@ Requires: python3dist(matplotlib)
Requires: python3dist(networkx)
%if %{with bundled_ipython}
Requires: python3dist(path.py)
-Requires: python3dist(pathlib2)
%endif
%if %{without bundled_pexpect}
Requires: python3dist(pexpect)
@@ -505,8 +484,8 @@ Requires: python3dist(sympy)
Requires: python3dist(zodb3)
Requires: qepcad-B
Requires: Singular
-# Required by widgetsnbextension and thebe; remove when they are unbundled
-Requires: stix-math-fonts
+# Required by thebe; remove when it is unbundled
+Requires: stix-fonts
Requires: sympow
Requires: tachyon
Requires: texlive
@@ -701,17 +680,18 @@ This package contains the Turkish %{name} documentation.
%endif
#------------------------------------------------------------------------
-%package notebook
-Summary: The Sage Notebook
+%package jupyter
+Summary: Jupyter integration for sagemath
Requires: %{name}%{?_isa} = %{version}-%{release}
Requires: python-jupyter-filesystem
-Requires: python3dist(flask-silk)
-Requires: python3dist(send2trash)
-Requires: vecmath
-%description notebook
-The Sage Notebook is a web-based graphical user interface for
-mathematical software.
+# This can be removed when Fedora 31 reaches EOL
+Obsoletes: sagemath-notebook < 9.0-1
+Provides: sagemath-notebook = %{version}-%{release}
+
+%description jupyter
+This package contains a Jupyter integration for sagemath, replacing the
+defunct notebook functionality.
#------------------------------------------------------------------------
%package rubiks
@@ -835,11 +815,6 @@ pushd build/pkgs/rubiks
popd
popd
-pushd build/pkgs/sagenb
- tar jxf ../../../upstream/%{sagenb_pkg}.tar.bz2
- mv %{sagenb_pkg} src
-popd
-
pushd build/pkgs/sagetex
tar zxf ../../../upstream/%{sagetex_pkg}.tar.gz
mv %{sagetex_pkg} src
@@ -901,14 +876,14 @@ popd
%patch14
%patch15
%patch16
-%patch17
%if %{with fes}
-%patch18
+%patch17
%else
-%patch19
+%patch18
%endif
+%patch19
%patch20
%patch21
%patch22
@@ -920,9 +895,6 @@ popd
%patch28
%patch29
%patch30
-%patch31
-%patch32
-%patch33
sed -e 's|@@SAGE_ROOT@@|%{SAGE_ROOT}|' \
-e 's|@@SAGE_DOC@@|%{SAGE_DOC}|' \
@@ -933,19 +905,10 @@ sed -e 's|@@CYSIGNALS@@|%{python3_sitearch}/cysignals|' \
-e 's|@@BUILDROOT@@|%{buildroot}|' \
-i src/setup.py
-sed -e "/flask-oldsessions/d" \
- -i build/pkgs/sagenb/src/setup.py
-
#------------------------------------------------------------------------
# some .c files are not (re)generated
find src/sage \( -name \*.pyx -o -name \*.pxd \) -exec touch {} \+
-# remove bundled jar files before build
-rm build/pkgs/sagenb/src/sagenb/data/sage3d/lib/sage3d.jar
-
-# remove binary egg
-rm -r build/pkgs/sagenb/src/sagenb.egg-info
-
# fix Singular paths
singver=$(sed 's/.*-\([.[:digit:]]*\).*/\1/' <<< %{singular_pkg})
sed -e "s,SINGULARPATH=\",&%{_datadir}/singular/LIB:," \
@@ -961,8 +924,8 @@ grep -FrlZ '#!%{_bindir}/env python' | \
xargs -0 sed -i 's,#!%{_bindir}/env python,#!%{__python3},g'
grep -FrlZ '#!%{_bindir}/env sage-system-python' | \
xargs -0 sed -i 's,#!%{_bindir}/env sage-system-python,#!%{__python3},g'
-grep -FrlZ '#!%{_bindir}/env sage-python23' | \
- xargs -0 sed -i 's,#!%{_bindir}/env sage-python23,#!%{__python3},g'
+grep -FrlZ '#!%{_bindir}/env sage-python' | \
+ xargs -0 sed -i 's,#!%{_bindir}/env sage-python,#!%{__python3},g'
grep -FrlZ 'sage-python23' | xargs -0 sed -i 's,sage-python23,python3,g'
grep -FrlZ '#!%{_bindir}/env' | \
xargs -0 sed -i 's,#!%{_bindir}/env ,#!%{_bindir}/,'
@@ -1089,10 +1052,6 @@ pushd src
popd
#------------------------------------------------------------------------
-pushd build/pkgs/sagenb/src
- %__python3 ./setup.py build
-popd
-
pushd build/pkgs/sagetex/src
%__python3 ./setup.py build
popd
@@ -1182,22 +1141,6 @@ pushd src
popd
#------------------------------------------------------------------------
-pushd build/pkgs/sagenb/src
- rm -f %{buildroot}%{python3_sitearch}/sagenb/data/sage3d/sage3d
- %py3_install "--install-purelib=%{python3_sitearch}"
- # jsmol
- ln -sf %{_jsdir}/jsmol $SAGE_SHARE/jsmol
- # sage3d
- rm -f %{buildroot}%{_bindir}/sage3d
-%if %{with sage3d}
- ln -sf %{SAGE_LOCAL}/bin/sage3d %{buildroot}%{python3_sitearch}/sagenb/data/sage3d/sage3d
-%endif
- ln -sf %{python3_sitearch}/sagenb %{buildroot}%{SAGE_SRC}/sagenb
- # use system mathjax
- ln -sf %{_jsdir}/mathjax %{buildroot}%{python3_sitearch}/sagenb/data/mathjax
-popd
-
-#------------------------------------------------------------------------
%if %{with bundled_pexpect}
pushd build/pkgs/pexpect/src
cp -fa pexpect $SAGE_PYTHONPATH
@@ -1408,16 +1351,6 @@ EOF
chmod +x %{buildroot}%{_bindir}/sage
#------------------------------------------------------------------------
-%if %{with sage3d}
-cat > %{buildroot}%{SAGE_LOCAL}/bin/sage3d << EOF
-#!/bin/sh
-
-java -classpath %{SAGE_SRC}/sage/sagenb/data/sage3d/lib/sage3d.jar:%{_javadir}/j3dcore.jar:%{_javadir}/vecmath.jar:%{_javadir}/j3dutils.jar org.sagemath.sage3d.ObjectViewerApp "\$1"
-EOF
-chmod +x %{buildroot}%{SAGE_LOCAL}/bin/sage3d
-%endif
-
-#------------------------------------------------------------------------
# adjust cython interface:
# o install csage headers
# o install .pxi and .pxd files
@@ -1546,13 +1479,6 @@ rm -fr %{buildroot}%{SAGE_DOC}/output/inventory
find %{buildroot}%{SAGE_DOC} -type d -name _sources -exec rm -fr {} \+
%endif
-# remove .po files
-rm %{buildroot}%{python3_sitearch}/sagenb/translations/*/LC_MESSAGES/*.po
-
-%if %{without sage3d}
-rm -r %{buildroot}%{python3_sitearch}/sagenb/data/sage3d
-%endif
-
# remove build directory in buildroot
[ -d %{buildroot}%{SAGE_SRC}/build ] &&
rm -r %{buildroot}%{SAGE_SRC}/build
@@ -1841,75 +1767,9 @@ rm -fr %{SAGE_LOCAL}/var/lib/sage/installed/database_cremona_ellcurve-%{cremona_
%endif
#------------------------------------------------------------------------
-%files notebook
+%files jupyter
%{SAGE_ETC}/notebook-ipython
-# GPLv2+
-%{SAGE_SRC}/sagenb
-%dir %{python3_sitearch}/sagenb
-%{python3_sitearch}/sagenb/*.py*
-%{python3_sitearch}/sagenb/__pycache__/
-%{python3_sitearch}/sagenb/data/__pycache__/
-%{python3_sitearch}/sagenb/testing/__pycache__/
-%{python3_sitearch}/sagenb-*.egg-info
-%dir %{python3_sitearch}/sagenb/data
-# BSD
-%{python3_sitearch}/sagenb/data/codemirror
-# MIT
-%{python3_sitearch}/sagenb/data/graph_editor
-# ASL 2.0
-%{python3_sitearch}/sagenb/data/highlight
# LGPLv2+
-%{SAGE_SHARE}/jsmol
-# (MIT or GPLv2) and (MIT and BSD and GPL)
-%{python3_sitearch}/sagenb/data/jquery
-# (MIT or GPLv2) and (MIT and BSD and GPL)
-%{python3_sitearch}/sagenb/data/jqueryui
-# Public Domain
-%{python3_sitearch}/sagenb/data/json
-# Symbolic link to $_jsdir/mathjax
-%{python3_sitearch}/sagenb/data/mathjax
-# Empty (do not run doctests flag file)
-%{python3_sitearch}/sagenb/data/nodoctest.py*
-# BSD
-%{python3_sitearch}/sagenb/data/openid-realselector
-# GPLv2+
-%{python3_sitearch}/sagenb/data/sage
-%if %{with sage3d}
-# GPLv2+
-%{python3_sitearch}/sagenb/data/sage3d
-%endif
-# LGPLv2+
-%{python3_sitearch}/sagenb/data/tiny_mce
-# LGPLv2+
-%{python3_sitearch}/sagenb/data/zorn
-# GPLv2+
-%{python3_sitearch}/sagenb/flask_version
-# GPLv2+
-%{python3_sitearch}/sagenb/interfaces
-# GPLv2+
-%{python3_sitearch}/sagenb/misc
-# GPLv2+
-%{python3_sitearch}/sagenb/notebook
-# GPLv2+
-%{python3_sitearch}/sagenb/simple
-# GPLv2+
-%{python3_sitearch}/sagenb/storage
-# GPLv2+
-%dir %{python3_sitearch}/sagenb/testing
-%{python3_sitearch}/sagenb/testing/*.py*
-%{python3_sitearch}/sagenb/testing/tests
-# ASL 2.0
-%{python3_sitearch}/sagenb/testing/selenium
-# GPLv2+
-%dir %{python3_sitearch}/sagenb/translations
-%lang(cs_CZ) %{python3_sitearch}/sagenb/translations/cs_CZ
-%lang(de_AT) %{python3_sitearch}/sagenb/translations/de_AT
-%lang(de_AT) %{python3_sitearch}/sagenb/translations/en_US
-%lang(de_AT) %{python3_sitearch}/sagenb/translations/es_ES
-%lang(de_AT) %{python3_sitearch}/sagenb/translations/fr_FR
-%lang(pt_BR) %{python3_sitearch}/sagenb/translations/pt_BR
-%lang(ru_RU) %{python3_sitearch}/sagenb/translations/ru_RU
-%lang(uk_UA) %{python3_sitearch}/sagenb/translations/uk_UA
%if %{with bundled_widgetsnbextension}
%config(noreplace) %{_sysconfdir}/jupyter/nbconfig/notebook.d/*.json
%{_datadir}/jupyter/nbextensions/*
@@ -1939,6 +1799,16 @@ rm -fr %{SAGE_LOCAL}/var/lib/sage/installed/database_cremona_ellcurve-%{cremona_
########################################################################
%changelog
+* Fri Feb 28 2020 Jerry James <loganjerry(a)gmail.com> - 9.0-1
+- Version 9.0 (bz 1756780, 1770880)
+- Drop upstreamed -ecm and -primecount patches
+- Add -escape patch
+- The old notebook (sagenb) is no longer shipped, so drop the -sagenb and
+ -sagenb-python3 patches, the -notebook subpackage, and some BRs
+- New -jupyter subpackage
+- Add suitesparse BR
+- Drop pathlib2 BR (bz 1797116)
+
* Thu Jan 30 2020 Fedora Release Engineering <releng(a)fedoraproject.org> - 8.9-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
diff --git a/sources b/sources
index 8e28ab9..a23c3dc 100644
--- a/sources
+++ b/sources
@@ -1,2 +1,2 @@
-SHA512 (cremona-2016-10-17.tar.gz) = 61f55ec5c15e32b5fdaf1fe8f2f3d50ba9afa542d8634918ec9493d739127f8c06a44b3cb1227a2979522baf61951ac37a67ae2b12c920958b04f8198d07ff57
-SHA512 (sage-8.9.tar.gz) = 056646488f0b3fc092057c7ff807762c2f98d13748e14540ae9a67ceb3a3d62f8c0263c80c61a36c423353d7051e2dfae466a3f452f3910d9ba95ef26b385e94
+SHA512 (cremona-2019-10-29.tar.gz) = 32fbb828f26f87191e39123762cfbd796aac9abf346f0dc981e8e3f390435b22d281be3031ea92ae7e18f4ce41af8054784ca0d550a08f17b05c54ca08b4c9c8
+SHA512 (sage-9.0.tar.gz) = b0d3af3e8e9dd587314a33ec2f68e901dcd18cdd2cce4444fea5f04669dab6bb3e7db7642ff3e9ef1b1ffaf7a6f3c26272f889e1f5fb8fd63d5f5b68b5d168ed
1
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