Sorry that this one didn't make it in time to be tagged for Fedora 12, but it will be available as a 0day update.
Fedora 10: https://admin.fedoraproject.org/updates/rpy-1.0.3-13.fc10,R-2.10.0-1.fc10
Fedora 11: https://admin.fedoraproject.org/updates/rpy-2.0.6-7.fc11,R-2.10.0-1.fc11
Fedora 12: https://admin.fedoraproject.org/updates/rpy-2.0.6-7.fc12,R-2.10.0-1.fc12
EL-4: https://admin.fedoraproject.org/updates/R-2.10.0-1.el4
EL-5: https://admin.fedoraproject.org/updates/R-2.10.0-1.el5
Remember that EL-4 and EL-5 updates for R have to sit in updates-testing for 3 weeks, unless they receive 3 "positive" karma votes. If you use these packages and you want them to hit the updates repository sooner, please test them and give feedback at the above links.
Thanks,
~spot
On 11/06/2009 05:42 AM, Tom "spot" Callaway wrote:
Sorry that this one didn't make it in time to be tagged for Fedora 12, but it will be available as a 0day update.
Brown-paper bag fix available to resolve scriptlet noise. With 2.10.0, we no longer need to generate search index.txt from the modules "CONTENTS" files.
We can also stop using the macro for the %post/%postun scriptlets in all R module packages, but for now, the script checks the version of R and only runs the index.txt generation bits if R < 2.10.0 (basically, a noop for everything we care about).
We probably need to coordinate a rebuild of all R modules as part of this, so it might not be a bad time to drop the %_R_make_search_index scriptlet macro everywhere.
Here's the links to the new update:
Fedora 10: https://admin.fedoraproject.org/updates/R-2.10.0-2.fc10
Fedora 11: https://admin.fedoraproject.org/updates/R-2.10.0-2.fc11
Fedora 12: https://admin.fedoraproject.org/updates/R-2.10.0-2.fc12
EL-4: https://admin.fedoraproject.org/updates/R-2.10.0-2.el4
EL-5: https://admin.fedoraproject.org/updates/R-2.10.0-2.el5
Remember that EL-4 and EL-5 updates for R have to sit in updates-testing for 3 weeks, unless they receive 3 "positive" karma votes. If you use these packages and you want them to hit the updates repository sooner, please test them and give feedback at the above links.
~spot
On Mon, 2009-11-09 at 14:32 +1000, Tom "spot" Callaway wrote:
We can also stop using the macro for the %post/%postun scriptlets in all R module packages, but for now, the script checks the version of R and only runs the index.txt generation bits if R < 2.10.0 (basically, a noop for everything we care about).
We probably need to coordinate a rebuild of all R modules as part of this, so it might not be a bad time to drop the %_R_make_search_index scriptlet macro everywhere.
I am planning on rebuilding all my bioconductor package to their latest version this week-end (hopefully fixing all the FTBFS, they all do!). I will kick out the %post and %postun at the same time.
Shall I also fix this in R2spec ?
Thanks,
Pierre
On 11/19/2009 04:43 PM, Pierre-Yves wrote:
On Mon, 2009-11-09 at 14:32 +1000, Tom "spot" Callaway wrote:
We can also stop using the macro for the %post/%postun scriptlets in all R module packages, but for now, the script checks the version of R and only runs the index.txt generation bits if R < 2.10.0 (basically, a noop for everything we care about).
We probably need to coordinate a rebuild of all R modules as part of this, so it might not be a bad time to drop the %_R_make_search_index scriptlet macro everywhere.
I am planning on rebuilding all my bioconductor package to their latest version this week-end (hopefully fixing all the FTBFS, they all do!). I will kick out the %post and %postun at the same time.
Shall I also fix this in R2spec ?
Sounds like a plan.
~spot
On Thu, 2009-11-19 at 22:43 +0100, Pierre-Yves wrote:
I am planning on rebuilding all my bioconductor package to their latest version this week-end (hopefully fixing all the FTBFS, they all do!). I will kick out the %post and %postun at the same time.
As you might have seen on the rawhide report, the updates are done at the CVS level. 13 packages are built and wait to be pushed on testing the other will come in the coming 2 weeks I think.
Also, the list of package in Fedora has been updated by Remi for the latest version of bioconductor: http://rpms.famillecollet.com/rpmphp/rpm.php?type=R He also created a page per package with some information (for example: http://rpms.famillecollet.com/rpmphp/zoom.php?rpm=R-abind )
Good week-end,
Pierre
r-devel@lists.fedoraproject.org
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José Abílio Matos -
Pierre-Yves Chibon -
Tom Callaway