I'm starting to build packages and all dependencies for an updated hdf5/netcdf/octave stack in a side tag. Please use:
fedpkg build --target=f35-build-side-44365
to build dependent packages until the side tag is merged back.
Dependent packages include:
HDF5: alembic armadillo avogadro2-libs bes bout++ cgnslib CheMPS2 dolfin espresso Field3D freefem++ gdal gdl grads h5py InsightToolkit jhdf5 LabPlot lammps libminc mathgl matio med moose ncl netcdf octave opencv OpenImageIO openms paraview petsc python-tables R-Rsolid slurm vigra vips votca-csg votca-xtp vtk
NetCDF: GMT R dx eccodes exodusii genesis-simulator grace grass grib_api nco ncview netcdf-cxx netcdf-fortran netcdf-perl netcdf4-python pymol qgis wgrib2
OCTAVE: COPASI GeographicLib mathgl NLopt octave-communications octave-control octave-dicom octave-doctest octave-general octave-gsl octave-image octave-interval octave-io octave-jsonlab octave-metch octave-miscellaneous octave-ncarray octave-netcdf octave-odepkg octave-optim octave-parallel octave-quaternion octave-signal octave-specfun octave-statistics octave-struct octave-symbolic pfstools plplot swig vfrnav
Any help with this would be greatly appreciated.
On 8/9/21 7:35 PM, devel@lists.fedoraproject.org wrote:
I'm starting to build packages and all dependencies for an updated hdf5/netcdf/octave stack in a side tag.
I've just submitted the updates for F35 and F36. There are a few packages have failed to build (mainly due to arm or other package issues - not many due to these updates it seems) and I'll be working on them and/or filing bugs for them shortly.
Hi Orion,
On Sun, Aug 15, 2021 at 8:17 PM Orion Poplawski orion@nwra.com wrote:
I've just submitted the updates for F35 and F36. There are a few packages have failed to build (mainly due to arm or other package issues
- not many due to these updates it seems) and I'll be working on them
and/or filing bugs for them shortly.
I've got a fix for mpsolve ready to go, but while the F35 update has gone through, the F36 update does not seem to have done so. The octave-6.3.0-1.fc36 package still has tag f36-build-side-44464:
https://koji.fedoraproject.org/koji/buildinfo?buildID=1817191
Is the side tag just taking a really long time to merge?
On 8/16/21 2:36 PM, Jerry James wrote:
Hi Orion,
On Sun, Aug 15, 2021 at 8:17 PM Orion Poplawski orion@nwra.com wrote:
I've just submitted the updates for F35 and F36. There are a few packages have failed to build (mainly due to arm or other package issues
- not many due to these updates it seems) and I'll be working on them
and/or filing bugs for them shortly.
I've got a fix for mpsolve ready to go, but while the F35 update has gone through, the F36 update does not seem to have done so. The octave-6.3.0-1.fc36 package still has tag f36-build-side-44464:
https://koji.fedoraproject.org/koji/buildinfo?buildID=1817191
Is the side tag just taking a really long time to merge?
That does appear to be the case, it's still pending:
https://bodhi.fedoraproject.org/updates/FEDORA-2021-de38a77e64
mpsolve wasn't even on my radar so thanks for taking care of that.
On Mon, Aug 16, 2021 at 11:22 PM Orion Poplawski orion@nwra.com wrote:
That does appear to be the case, it's still pending:
https://bodhi.fedoraproject.org/updates/FEDORA-2021-de38a77e64
It's not just taking long, it's stuck. It even gives you a hint as to *why* it's still pending: "This update cannot be pushed to stable. These builds qgis-3.20.1-3.fc36 have a more recent build in koji's f36 tag."
Looks like somebody rebuilt qgis in rawhide while the side-tag was in-flight. You'll need to do do another release bump and rebuild it again in the side tag, and then edit the bodhi update to refresh the list of builds. After that's done, bodhi should push the update to stable without further problems.
Fabio
On 8/16/21 3:29 PM, Fabio Valentini wrote:
On Mon, Aug 16, 2021 at 11:22 PM Orion Poplawski orion@nwra.com wrote:
That does appear to be the case, it's still pending:
https://bodhi.fedoraproject.org/updates/FEDORA-2021-de38a77e64
It's not just taking long, it's stuck. It even gives you a hint as to *why* it's still pending: "This update cannot be pushed to stable. These builds qgis-3.20.1-3.fc36 have a more recent build in koji's f36 tag."
Looks like somebody rebuilt qgis in rawhide while the side-tag was in-flight. You'll need to do do another release bump and rebuild it again in the side tag, and then edit the bodhi update to refresh the list of builds. After that's done, bodhi should push the update to stable without further problems.
Fabio
Thanks - I had just finally managed to actually read the page myself and found that out :facepalm:. New qgis build has been started...
On Mon, 9 Aug 2021 at 21:42, Orion Poplawski orion@nwra.com wrote:
I'm starting to build packages and all dependencies for an updated hdf5/netcdf/octave stack in a side tag. Please use:
fedpkg build --target=f35-build-side-44365
to build dependent packages until the side tag is merged back.
Is this already in Rawhide (but not F35)? python-tables appears to be crashing on Rawhide due to mismatched headers, but not on F35.
On 8/21/21 4:54 PM, Elliott Sales de Andrade wrote:
On Mon, 9 Aug 2021 at 21:42, Orion Poplawski orion@nwra.com wrote:
I'm starting to build packages and all dependencies for an updated hdf5/netcdf/octave stack in a side tag. Please use:
fedpkg build --target=f35-build-side-44365
to build dependent packages until the side tag is merged back.
Is this already in Rawhide (but not F35)? python-tables appears to be crashing on Rawhide due to mismatched headers, but not on F35.
This is now in both rawhide and f35. python-tables is failing to build with hdf5 1.10.7. It's been reported upstream but no action so far.
https://bugzilla.redhat.com/show_bug.cgi?id=1994181
On Mon, 9 Aug 2021 at 21:42, Orion Poplawski orion@nwra.com wrote:
I'm starting to build packages and all dependencies for an updated hdf5/netcdf/octave stack in a side tag. Please use:
fedpkg build --target=f35-build-side-44365
to build dependent packages until the side tag is merged back.
Dependent packages include:
NetCDF: GMT R dx eccodes exodusii genesis-simulator grace grass grib_api nco ncview netcdf-cxx netcdf-fortran netcdf-perl netcdf4-python pymol qgis wgrib2
PS, it looks like you missed R-ncdf4 on this list; not sure if there are others.
On 8/21/21 8:19 PM, Elliott Sales de Andrade wrote:
On Mon, 9 Aug 2021 at 21:42, Orion Poplawski orion@nwra.com wrote:
I'm starting to build packages and all dependencies for an updated hdf5/netcdf/octave stack in a side tag.
PS, it looks like you missed R-ncdf4 on this list; not sure if there are others.
Indeed I did, sorry about that. Thanks for taking care of it.
-
Elliott Sales de Andrade -
Fabio Valentini -
Jerry James -
Orion Poplawski